Evidence map›Paper›PMID 22822426›Full record

ArticleScientific reports2012

A Bayesian analysis of the chromosome architecture of human disorders by integrating reductionist data.

Frank Emmert-Streib, Ricardo de Matos Simoes, Shailesh Tripathi, Galina V Glazko, Matthias Dehmer

Abstract read
In one paragraph

Article in Scientific reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Frank Emmert-StreibComputational Biology and Machine Learning Lab, Center forCancer Research and Cell Biology, School of Medicine, Dentistry and Biomedical Sciences, Queen’s University Belfast, 97 Lisburn Road, Belfast, UK. v@bio-complexity.com
Ricardo de Matos Simoes
Shailesh Tripathi
Galina V Glazko
Matthias Dehmer

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this paper, we present a Bayesian approach to estimate a chromosome and a disorder network from the Online Mendelian Inheritance in Man (OMIM) database. In contrast to other approaches, we obtain statistic rather than deterministic networks enabling a parametric control in the uncertainty of the underlying disorder-disease gene associations contained in the OMIM, on which the networks are based. From a structural investigation of the chromosome network, we identify three chromosome subgroups that reflect architectural differences in chromosome-disorder associations that are predictively exploitable for a functional analysis of diseases.

Indexed as

Physical Chromosome MappingAlgorithmsBayes TheoremChromosome DisordersComputational BiologyDatabases, GeneticGenetic Association StudiesHumansInternetLod ScoreMaleModels, StatisticalMolecular Sequence AnnotationOpen Reading Frames

Identifiers

PMID22822426
PMCPMC3400933

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.