Evidence map›Paper›PMID 22822423›Full record

ArticleChemical science2011

Borrelidin modulates the alternative splicing of VEGF in favour of anti-angiogenic isoforms.

Jeanette Woolard, William Vousden, Steven J Moss, Arjun Krishnakumar, Melissa Vr Gammons, David G Nowak, Neil Dixon, Jason Micklefield, Astrid Spannhoff, Mark T Bedford and 7 more

Open access · greenAbstract read
In one paragraph

Article in Chemical science, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Aminoacyl-tRNA synthetases as therapeutic targets.Nature reviews. Drug discovery · 2019
    Review
  5. Article
  6. Alternative Splicing as a Target for Cancer Treatment.International journal of molecular sciences · 2018
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Analogs of natural aminoacyl-tRNA synthetase inhibitors clear malaria in vivo.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Jeanette WoolardMicrovascular Research Laboratories, Bristol Heart Institute, Department of Physiology and Pharmacology, School of Veterinary Sciences, University of Bristol, Southwell Street Bristol, BS2 8EJ, UK. ; Tel: +44 (0)117 9289818; dave.bates@bristol.ac.uk.
William Vousden
Steven J Moss
Arjun Krishnakumar
Melissa Vr Gammons
David G Nowak
Neil Dixon
Jason Micklefield
Astrid Spannhoff
Mark T Bedford
Matthew A Gregory
Christine J Martin
Peter F Leadlay
Ming Q Zhang
Steven J Harper
David O Bates
Barrie Wilkinson
University of Bristol · GBThe University of Texas MD Anderson Cancer Center · USUniversity of Manchester · GBUniversity of Cambridge · GB

Funding

Applying peptide and protein domain microarrays to epigenetic researchR21DA025800 · NIDA · STANFORD UNIVERSITY · PI BEDFORD, MARK T., GOZANI, OR P. · 2008 to 2009
$743k
British Heart Foundation BS/06/005/20340NIDA NIH HHS R21 DA025800Wellcome Trust 079663
6 · The paper itself

Abstract

The polyketide natural product borrelidin 1 is a potent inhibitor of angiogenesis and spontaneous metastasis. Affinity biopanning of a phage display library of colon tumor cell cDNAs identified the tandem WW domains of spliceosome-associated protein formin binding protein 21 (FBP21) as a novel molecular target of borrelidin, suggesting that borrelidin may act as a modulator of alternative splicing. In support of this idea, 1, and its more selective analog 2, bound to purified recombinant WW domains of FBP21. They also altered the ratio of vascular endothelial growth factor (VEGF) isoforms in retinal pigmented endothelial (RPE) cells in favour of anti-angiogenic isoforms. Transfection of RPE cells with FBP21 altered the ratio in favour of pro-angiogenic VEGF isoforms, an effect inhibited by 2. These data implicate FBP21 in the regulation of alternative splicing and suggest the potential of borrelidin analogs as tools to deconvolute key steps of spliceosome function.

Identifiers

PMID22822423
PMCPMC3399765
OpenAlexW2072884486

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.