Evidence map›Paper›PMID 22822025›Full record

ArticleAmerican journal of respiratory and critical care medicine2012

Variation in PTX3 is associated with primary graft dysfunction after lung transplantation.

Joshua M Diamond, Nuala J Meyer, Rui Feng, Melanie Rushefski, David J Lederer, Steven M Kawut, James C Lee, Edward Cantu, Rupal J Shah, Vibha N Lama and 16 more

Abstract read
In one paragraph

Article in American journal of respiratory and critical care medicine, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 1 synthesis or guideline pooled it, 75 citations in OpenAlex.

  1. Pooled it
  2. Genetic variation in the prostaglandin E2 pathway is associated with primary graft dysfunction.American journal of respiratory and critical care medicine · 2014
    Trial
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. American journal of respiratory and critical care medicine · 2024
    Observational
  9. Article
  10. Article
  11. Article
  12. Subphenotypes of frailty in lung transplant candidates.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2023
    Article
  13. Article
  14. Frailty and genetic risk predict fracture after lung transplantation.American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons · 2023
    Article
  15. Article
  16. Article
  17. Review
  18. Primary graft dysfunction: what we know.Journal of thoracic disease · 2021
    Review
  19. Article
  20. Sterile inflammation in thoracic transplantation.Cellular and molecular life sciences : CMLS · 2021
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

26 authors at 14 institutions in 2 countries.

Joshua M DiamondPulmonary, Allergy, and Critical Care Division, University of Pennsylvania School of Medicine, 3400 Spruce St., 8 West Gates, Philadelphia, PA 19104, USA. joshua.diamond@uphs.upenn.edu
Nuala J Meyer
Rui Feng
Melanie Rushefski
David J Lederer
Steven M Kawut
James C Lee
Edward Cantu
Rupal J Shah
Vibha N Lama
Sangeeta Bhorade
Maria Crespo
Ejigayehu Demissie
Joshua Sonett
Keith Wille
Jonathan Orens
Ann Weinacker
David Weill
Selim Arcasoy
Pali D Shah
John A Belperio
David Wilkes
Lorraine B Ware
Scott M Palmer
Jason D Christie
Lung Transplant Outcomes Group
California University of Pennsylvania · USDuke University · USJohns Hopkins University · USStanford University · USCardiovascular Institute of the South · USChildren's Hospital of Philadelphia · USColumbia University · USIndiana University School of MedicineUniversity of Alabama at Birmingham · USUniversity of California, Los Angeles · USUniversity of Chicago · USUniversity of Michigan · USUniversity of Pennsylvania · USUniversity of Pittsburgh · US

Funding

Cardiology & pulmonary research training grantT32HL007891 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI Jason D Christie · 1998 to 2026
$12.0M
Clinical Risk Factors for Primary Graft DysfunctionR01HL087115 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI CHRISTIE, JASON D · 2007 to 2017
$7.1M
Genetics of primary graft dysfunctionR01HL081619 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI CHRISTIE, JASON D · 2007 to 2011
$3.9M
Role of anti-Col (V) immunity in primary graft dysfunctionR01HL096845 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI CHRISTIE, JASON D, WILKES, DAVID S · 2010 to 2013
$2.2M
Midcareer Investigator Award in Patient-Oriented Research in Acute Lung InjuryK24HL103836 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI WARE, LORRAINE B · 2010 to 2020
$1.6M
Mentored Patient-Oriented Research in Pulmonary Arterial HypertensionK24HL103844 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI KAWUT, STEVEN M · 2011 to 2020
$1.6M
Lung Transplant donor: prediction, evaluation, and mechanismK23HL116656 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI CANTU, EDWARD · 2013 to 2017
$872k
Genetic Variation in the ANGPT-TIE Pathway and Risk for Acute Lung InjuryK23HL102254 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MEYER, NUALA JENNINGS · 2010 to 2014
$685k
NHLBI NIH HHS K23 HL102254NHLBI NIH HHS K23 HL116656NHLBI NIH HHS K24 HL103836NHLBI NIH HHS K24 HL103844NHLBI NIH HHS L30 HL097857NHLBI NIH HHS R01 HL081619NHLBI NIH HHS R01 HL087115NHLBI NIH HHS R01 HL096845NHLBI NIH HHS T32 HL007891
6 · The paper itself

Abstract

rationaleElevated long pentraxin-3 (PTX3) levels are associated with the development of primary graft dysfunction (PGD) after lung transplantation. Abnormalities in innate immunity, mediated by PTX3 release, may play a role in PGD pathogenesis.

objectivesOur goal was to test whether variants in the gene encoding PTX3 are risk factors for PGD.

methodsWe performed a candidate gene association study in recipients from the multicenter, prospective Lung Transplant Outcomes Group cohort enrolled between July 2002 and July 2009. The primary outcome was International Society for Heart and Lung Transplantation grade 3 PGD within 72 hours of transplantation. Targeted genotyping of 10 haplotype-tagging PTX3 single-nucleotide polymorphisms (SNPs) was performed in lung transplant recipients. The association between PGD and each SNP was evaluated by logistic regression, adjusting for pretransplantation lung disease, cardiopulmonary bypass use, and population stratification. The association between SNPs and plasma PTX3 levels was tested across genotypes in a subset of recipients with idiopathic pulmonary fibrosis. MEASUREMENTS AND MAIN

resultsSix hundred fifty-four lung transplant recipients were included. The incidence of PGD was 29%. Two linked 5' region variants, rs2120243 and rs2305619, were associated with PGD (odds ratio, 1.5; 95% confidence interval, 1.1 to 1.9; P = 0.006 and odds ratio, 1.4; 95% confidence interval, 1.1 to 1.9; P = 0.007, respectively). The minor allele of rs2305619 was significantly associated with higher plasma PTX3 levels measured pretransplantation (P = 0.014) and at 24 hours (P = 0.047) after transplantation in patients with idiopathic pulmonary fibrosis.

conclusionsGenetic variants of PTX3 are associated with PGD after lung transplantation, and are associated with increased PTX3 plasma levels.

Indexed as

Polymorphism, Single NucleotideCohort StudiesConfidence IntervalsC-Reactive ProteinFemaleFollow-Up StudiesGenetic Association StudiesGenotypeGraft RejectionGraft SurvivalHaplotypesHumansIdiopathic Pulmonary FibrosisIncidenceLogistic ModelsLung TransplantationC-Reactive ProteinPentraxinsSerum Amyloid P-Component

Identifiers

PMID22822025
PMCPMC3480532
OpenAlexW2031677051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.