Evidence map›Paper›PMID 22821014›Full record

ArticleProtein & cell2012

Crystal structure and functional implication of the RUN domain of human NESCA.

Qifan Sun, Chuanhui Han, Lan Liu, Yizhi Wang, Hongyu Deng, Lin Bai, Tao Jiang

Open access · bronzeAbstract read
In one paragraph

Article in Protein & cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Crystal structure of the FYCO1 RUN domain suggests possible interfaces with small GTPases.Acta crystallographica. Section F, Structural biology communications · 2020
    Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Qifan SunNational Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.
Chuanhui Han
Lan Liu
Yizhi Wang
Hongyu Deng
Lin Bai
Tao Jiang
Institute of Biophysics · CNChinese Academy of Sciences · CNUniversity of Chinese Academy of Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NESCA, a newly discovered signaling adapter protein in the NGF-pathway, contains a RUN domain at its N-terminus. Here we report the crystal structure of the NESCA RUN domain determined at 2.0-Å resolution. The overall fold of the NESCA RUN domain comprises nine helices, resembling the RUN domain of RPIPx and the RUN1 domain of Rab6IP1. However, compared to the other RUN domains, the RUN domain of NESCA has significantly different surface electrostatic distributions at the putative GTPase-interacting interface. We demonstrate that the RUN domain of NESCA can bind H-Ras, a downstream signaling molecule of TrkA, with high affinity. Moreover, NESCA RUN can directly interact with TrkA. These results provide new insights into how NESCA participates in the NGF-TrkA signaling pathway.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid SequenceBinding SitesCrystallography, X-RayGene ExpressionGuanine Nucleotide Exchange FactorsHumansModels, MolecularMolecular Sequence DataNerve Growth FactorOncogene Protein p21(ras)Protein BindingProtein Structure, Tertiaryrab GTP-Binding ProteinsReceptor, trkARecombinant ProteinsAdaptor Proteins, Signal TransducingDENND5A protein, humanGuanine Nucleotide Exchange FactorsNerve Growth FactorOncogene Protein p21(ras)rab GTP-Binding ProteinsReceptor, trkARecombinant ProteinsRUSC1 protein, human

Identifiers

PMID22821014
PMCPMC4875354
OpenAlexW2035995682

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.