Evidence map›Paper›PMID 22820404›Full record

ArticleVirus research2012

Severe acute respiratory syndrome coronavirus accessory proteins 6 and 9b interact in vivo.

Enrique Calvo, Marta L DeDiego, Pilar García, Juan A López, Pilar Pérez-Breña, Ana Falcón

Abstract read
In one paragraph

Article in Virus research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Enrique CalvoUnidad de Proteómica, Centro Nacional de Investigaciones Cardiovasculares, Madrid, Spain.
Marta L DeDiego
Pilar García
Juan A López
Pilar Pérez-Breña
Ana Falcón
Centro Nacional de Microbiologia · ESSpanish National Centre for Cardiovascular Research · ESCentro Nacional de Biotecnología · ESInstituto de Salud Carlos III · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 3'proximal one-third of the severe acute respiratory syndrome coronavirus (SARS-CoV) genome encodes the structural proteins and eight accessory proteins, including 3a, 3b, 6, 7a, 7b, 8a, 8b and 9b, varying in length from 39 to 274aa which do not share significant homology with viral proteins of known coronaviruses. The SARS-CoV protein 6 is 63 amino acids in length and has been previously involved in virus pathogenicity and replication. To further analyze this functions, the interaction of SARS-CoV protein 6 with other viral and/or cellular factors has been analyzed during SARS-CoV infective cycle. Protein 6 immunoprecipitation from extracts of SARS-CoV infected cells and mass spectrometry analysis revealed an interaction of viral proteins 6 and 9b in biologically relevant conditions. This interaction has been reinforced by co-localization of both proteins in the cytoplasm of SARS-CoV infected cells.

Indexed as

Protein Interaction MappingAmino Acid SequenceAnimalsChlorocebus aethiopsImmunoprecipitationMass SpectrometryMolecular Sequence DataSevere acute respiratory syndrome-related coronavirusVero CellsViral Regulatory and Accessory ProteinsViral Regulatory and Accessory Proteins

Identifiers

PMID22820404
PMCPMC7114373
OpenAlexW1965163359

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.