Evidence map›Paper›PMID 22819534›Full record

ArticleThe American journal of pathology2012

KLF6 loss of function in human prostate cancer progression is implicated in resistance to androgen deprivation.

XiaoMei Liu, Alejandro Gomez-Pinillos, Charisse Loder, Enrique Carrillo-de Santa Pau, Ruifang Qiao, Pamela D Unger, Ralf Kurek, Carole Oddoux, Jonathan Melamed, Robert E Gallagher and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Alternative splicing in prostate cancer.Nature reviews. Clinical oncology · 2018
    Review
  8. Review
  9. Targeting Splicing in Prostate Cancer.International journal of molecular sciences · 2018
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Krüppel-like factors in cancer.Nature reviews. Cancer · 2013
    Review
  18. Review
  19. Effects of Kruppel-like factor 6 on osteosarcoma cell biological behavior.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2013
    Article
  20. Alternative splicing programs in prostate cancer.International journal of cell biology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 3 countries.

XiaoMei LiuDepartment of Medicine, New York University Cancer Institute, New York, USA.
Alejandro Gomez-Pinillos
Charisse Loder
Enrique Carrillo-de Santa Pau
Ruifang Qiao
Pamela D Unger
Ralf Kurek
Carole Oddoux
Jonathan Melamed
Robert E Gallagher
John Mandeli
Anna C Ferrari
Icahn School of Medicine at Mount Sinai · USNew York University · USUniversity of Rochester Medical Center · USAlbert Einstein College of Medicine · USMontefiore Medical Center · USSpanish National Cancer Research Centre · ESZentrum für Psychiatrie Südwürttemberg · DE

Funding

KLF6 Gene and Clinical Correlates in Prostate CancerR01CA098135 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI FERRARI, ANNA C · 2003 to 2005
$1.0M
NCI NIH HHS R01 CA098135NCI NIH HHS R01 CA098135-03
6 · The paper itself

Abstract

Inactivation of the transcription factor/tumor suppressor Krüppel-like factor 6 (KLF6) has been described in prostate cancer (PC). This study investigated the prevalence and significance of KLF6 exon 2 mutations and splice variants (SVs) in different stages of human PC progression. By using laser-capture microdissection and recombinant clone isolation of DNA sequences to enhance sensitivity, base changes were found in 20 (24.7%) of 81 PC tissues versus 1 (4%) of 25 normal prostate tissues (P = 0.02). Of 26 base changes, 54% produced nonsynonymous mutations. Only three mutations had driver characteristics (PCs, 4%; NPs, 0%). By using microdissection of fresh-frozen tissues and recombinant isolation of RNA sequences, SVs were found in 39 (75%) of 52 PCs and in 10 (45%) of 22 NPs (P = 0.01). Sixteen different SVs, including 13 unique SVs, were identified that used cryptic splicing sites and encoded nonfunctional KLF6 proteins. PCs that had survived hormone (androgen)-deprivation therapy (n = 21) had a significantly higher (P < 0.05) incidence, number, and expression level of nonfunctional SVs than either NPs (n = 22) or hormone-naïve PCs (n = 25). Forced expression of nonfunctional SVs conferred a survival advantage of androgen-dependent LNCaP cells under castration-simulated culture conditions. Together, these data suggest that decreased availability of functional KLF6 contributes to clinical PC progression. This decrease arises infrequently by somatic mutation and more commonly by the acquisition of SVs that provide a survival advantage under castrate conditions, enabling resistance to hormone therapy.

Indexed as

Disease ProgressionAlternative SplicingAndrogensCell Line, TumorCell ProliferationCell SurvivalDNA Mutational AnalysisExonsHumansKruppel-Like Factor 6Kruppel-Like Transcription FactorsMaleProstatic NeoplasmsProto-Oncogene ProteinsTranscriptional ActivationTranscription, GeneticAndrogensKLF6 protein, humanKruppel-Like Factor 6Kruppel-Like Transcription FactorsProto-Oncogene Proteins

Identifiers

PMID22819534
PMCPMC3432435
OpenAlexW2090368869

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.