Evidence map›Paper›PMID 22818067›Full record

ArticleJournal of the American College of Cardiology2012

Chromosome 4q25 variants are genetic modifiers of rare ion channel mutations associated with familial atrial fibrillation.

Marylyn D Ritchie, Shane Rowan, Gayle Kucera, Tanya Stubblefield, Marcia Blair, Shannon Carter, Dan M Roden, Dawood Darbar

Abstract read
In one paragraph

Article in Journal of the American College of Cardiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Article
  3. Case report: Mutation inFrontiers in cardiovascular medicine · 2023
    Article
  4. Article
  5. Review
  6. Genetics and Epigenetics of Atrial Fibrillation.International journal of molecular sciences · 2020
    Review
  7. Article
  8. Review
  9. Article
  10. A comprehensive in silico analysis, distribution and frequency of humanJournal of cardiovascular and thoracic research · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Review
  18. EHRA/HRS/APHRS/SOLAECE expert consensus on atrial cardiomyopathies: definition, characterization, and clinical implication.Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology · 2016
    Article
  19. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Marylyn D RitchieDepartment of Molecular Physiology and Biophysics, Vanderbilt University School of Medicine, Nashville, TN, USA.
Shane Rowan
Gayle Kucera
Tanya Stubblefield
Marcia Blair
Shannon Carter
Dan M Roden
Dawood Darbar
Vanderbilt University · US

Funding

PHARMACOGENOMICS OF ARRHYTHMIA THERAPYU01HL065962 · NHLBI · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2001 to 2009
$24.8M
Pharmacogenomics of Arrhythmia TherapyU19HL065962 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RODEN, DAN M · 2010 to 2014
$17.4M
Positional Cloning and Candidate Gene Approach to Familial Atrial FibrillationR01HL092217 · NHLBI · VANDERBILT UNIVERSITY · PI DARBAR, DAWOOD · 2009 to 2017
$2.9M
The Genetic Basis of Atrial FibrillationK23HL075266 · NHLBI · VANDERBILT UNIVERSITY · PI DARBAR, DAWOOD · 2005 to 2009
$745k
NHLBI NIH HHS HL075266NHLBI NIH HHS HL65962NHLBI NIH HHS K23 HL075266NHLBI NIH HHS R01 HL092217NHLBI NIH HHS U01 HL065962NHLBI NIH HHS U19 HL065962
6 · The paper itself

Abstract

objectivesThe aim of this study was to test the hypothesis that 2 common polymorphisms in the chromosome 4q25 region that have been associated with atrial fibrillation (AF) contribute to the variable penetrance of familial AF.

backgroundAlthough mutations in ion channels, gap junction proteins, and signaling molecules have been described for Mendelian forms of AF, penetrance is highly variable. Recent studies have consistently identified 2 common single-nucleotide polymorphisms in the chromosome 4q25 region as independent AF susceptibility alleles.

methodsEleven families in which AF was present in ≥2 members who also shared a candidate gene mutation were studied. These mutations were identified in all subjects with familial lone AF (n = 33) as well as apparently unaffected family members (age >50 years with no AF; n = 17).

resultsMutations were identified in SCN5A (n = 6), NPPA (n = 2), KCNQ1 (n = 1), KCNA5 (n = 1), and NKX2.5 (n = 1). In genetic association analyses, unstratified and stratified according to age of onset of AF and unaffected age >50 years, there was a highly statistically significant association between the presence of both common (rs2200733 and rs10033464) and rare variants and AF (unstratified p = 1 × 10(-8), stratified [age of onset <50 years and unaffected age >50 years] p = 7.6 × 10(-5)) (unstratified p < 0.0001, stratified [age of onset <50 years and unaffected age >50 years] p < 0.0001). Genetic association analyses showed that the presence of common 4q25 risk alleles predicted whether carriers of rare mutations developed AF (p = 2.2 × 10(-4)).

conclusionsCommon AF-associated 4q25 polymorphisms modify the clinical expression of latent cardiac ion channel and signaling molecule gene mutations associated with familial AF. These findings support the idea that the genetic architecture of AF is complex and includes both rare and common genetic variants.

Indexed as

Genetic Predisposition to DiseaseAdultAgedAtrial FibrillationAtrial Natriuretic FactorChromosomes, Human, Pair 4Cohort StudiesGenotypeHomeobox Protein Nkx-2.5Homeodomain ProteinsHumansIon ChannelsKCNQ1 Potassium ChannelKv1.5 Potassium ChannelMiddle AgedMutationAtrial Natriuretic FactorHomeobox Protein Nkx-2.5Homeodomain ProteinsIon ChannelsKCNA5 protein, humanKCNQ1 Potassium ChannelKCNQ1 protein, humanKv1.5 Potassium ChannelNAV1.5 Voltage-Gated Sodium ChannelNKX2-5 protein, humanNPPA protein, humanSCN5A protein, humanTranscription Factors

Identifiers

PMID22818067
PMCPMC3448817
OpenAlexW2038528620

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.