Evidence map›Paper›PMID 22815990›Full record

ArticlePloS one2012

Microbial community analysis of a coastal salt marsh affected by the Deepwater Horizon oil spill.

Melanie J Beazley, Robert J Martinez, Suja Rajan, Jessica Powell, Yvette M Piceno, Lauren M Tom, Gary L Andersen, Terry C Hazen, Joy D Van Nostrand, Jizhong Zhou and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
18.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 183 citations in OpenAlex.

  1. Article
  2. Bioturbation by the Ghost ShrimpMicroorganisms · 2026
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  16. Article
  17. Hydrocarbon-Degrading BacteriaFrontiers in microbiology · 2020
    Article
  18. Article
  19. Article
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Melanie J BeazleyDepartment of Biological Sciences, University of Alabama, Tuscaloosa, Alabama, United States of America.
Robert J Martinez
Suja Rajan
Jessica Powell
Yvette M Piceno
Lauren M Tom
Gary L Andersen
Terry C Hazen
Joy D Van Nostrand
Jizhong Zhou
Behzad Mortazavi
Patricia A Sobecky
University of Alabama · USLawrence Berkeley National Laboratory · USUniversity of Oklahoma · USUniversity of Tennessee at Knoxville · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coastal salt marshes are highly sensitive wetland ecosystems that can sustain long-term impacts from anthropogenic events such as oil spills. In this study, we examined the microbial communities of a Gulf of Mexico coastal salt marsh during and after the influx of petroleum hydrocarbons following the Deepwater Horizon oil spill. Total hydrocarbon concentrations in salt marsh sediments were highest in June and July 2010 and decreased in September 2010. Coupled PhyloChip and GeoChip microarray analyses demonstrated that the microbial community structure and function of the extant salt marsh hydrocarbon-degrading microbial populations changed significantly during the study. The relative richness and abundance of phyla containing previously described hydrocarbon-degrading bacteria (Proteobacteria, Bacteroidetes, and Actinobacteria) increased in hydrocarbon-contaminated sediments and then decreased once hydrocarbons were below detection. Firmicutes, however, continued to increase in relative richness and abundance after hydrocarbon concentrations were below detection. Functional genes involved in hydrocarbon degradation were enriched in hydrocarbon-contaminated sediments then declined significantly (p<0.05) once hydrocarbon concentrations decreased. A greater decrease in hydrocarbon concentrations among marsh grass sediments compared to inlet sediments (lacking marsh grass) suggests that the marsh rhizosphere microbial communities could also be contributing to hydrocarbon degradation. The results of this study provide a comprehensive view of microbial community structural and functional dynamics within perturbed salt marsh ecosystems.

Indexed as

Petroleum PollutionWetlandsAlabamaEcosystemGas Chromatography-Mass SpectrometryGeographyGeologic SedimentsGulf of AmericaHydrocarbonsOligonucleotide Array Sequence AnalysisPetroleumPolymerase Chain ReactionRhizosphereSaltsSequence Analysis, DNAHydrocarbonsPetroleumSalts

Identifiers

PMID22815990
PMCPMC3399869
OpenAlexW2134405228

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.