Evidence map›Paper›PMID 22815903›Full record

ArticlePloS one2012

Pak1 regulates the orientation of apical polarization and lumen formation by distinct pathways.

Orlando deLeon, Jason M Puglise, Fengming Liu, Jos Smits, Martin B ter Beest, Mirjam M Zegers

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Orlando deLeonDepartment of Surgery, University of Chicago, Chicago, Illinois, United States of America.
Jason M Puglise
Fengming Liu
Jos Smits
Martin B ter Beest
Mirjam M Zegers
University of Chicago · USRadboud University Nijmegen · NL

Funding

Regulation of epithelial contact inhibition by Rac effector proteinsR01GM076363 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ZEGERS, MIRJAM M. · 2006 to 2010
$1.3M
NIGMS NIH HHS GM076363NIGMS NIH HHS R01 GM076363
6 · The paper itself

Abstract

The development of the basic architecture of branching tubules enclosing a central lumen that characterizes most epithelial organs crucially depends on the apico-basolateral polarization of epithelial cells. Signals from the extracellular matrix control the orientation of the apical surface, so that it faces the lumen interior, opposite to cell-matrix adhesion sites. This orientation of the apical surface is thought to be intrinsically linked to the formation of single lumens. We previously demonstrated in three-dimensional cyst cultures of Madin-Darby canine kidney (MDCK) cells that signaling by β1 integrins regulates the orientation of the apical surface, via a mechanism that depends on the activity of the small GTPase Rac1. Here, we investigated whether the Rac1 effector Pak1 is a downstream effector in this pathway. Expression of constitutive active Pak1 phenocopies the effect of β1 integrin inhibition in that it misorients the apical surface and induces a multilumen phenotype. The misorientation of apical surfaces depends on the interaction of active Pak1 with PIX proteins and is linked to defects in basement membrane assembly. In contrast, the multilumen phenotype was independent of PIX and the basement membrane. Therefore, Pak1 likely regulates apical polarization and lumen formation by two distinct pathways.

Indexed as

Gene Expression RegulationAnimalsBiotinylationCell LineCell-Matrix JunctionsCell PolarityDogsExtracellular MatrixGTP PhosphohydrolasesIntegrin beta1Microscopy, ConfocalModels, Biologicalp21-Activated KinasesPhenotypeRNA, Small InterferingTrypsinGTP PhosphohydrolasesIntegrin beta1p21-Activated KinasesRNA, Small InterferingTrypsin

Identifiers

PMID22815903
PMCPMC3399788
OpenAlexW2161260093

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.