Evidence map›Paper›PMID 22815877›Full record

ArticlePloS one2012

Genistein affects histone modifications on Dickkopf-related protein 1 (DKK1) gene in SW480 human colon cancer cell line.

Huan Wang, Qian Li, Hong Chen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
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  4. Article
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  6. Cancers · 2024
    Article
  7. Review
  8. Article
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  10. Article
  11. Review
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  15. Review
  16. Review
  17. Review
  18. Correlations of DKK1 with pathogenesis and prognosis of human multiple myeloma.Cancer biomarkers : section A of Disease markers · 2019
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Huan WangDepartment of Food Science and Human Nutrition, University of Illinois at Urbana-Champaign, Urbana, Illinois, United States of America.
Qian Li
Hong Chen
University of Illinois Urbana-Champaign · US

Funding

Gene-Specific Epigenetic Programming of WNT Signaling Pathway by Dietary SoyR03CA135262 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHEN, HONG · 2008 to 2009
$187k
NCI NIH HHS CA135262NCI NIH HHS R03 CA135262
6 · The paper itself

Abstract

Genistein (GEN) is a plant-derived isoflavone and can block uncontrolled cell growth in colon cancer by inhibiting the WNT signaling pathway. This study aimed to test the hypothesis that the enhanced gene expression of the WNT signaling pathway antagonist, DKK1 by genistein treatment is associated with epigenetic modifications of the gene in colon cancer cells. Genistein treatment induced a concentration-dependent G2 phase arrest in the human colon cancer cell line SW480 and reduced cell proliferation. Results from several other human colon cancer cell lines confirmed the growth inhibitory effects of genistein. Overexpression of DKK1 confirmed its involvement in growth inhibition. Knockdown of DKK1 expression by siRNA slightly induced cell growth. DKK1 gene expression was increased by genistein in SW480 and HCT15 cells. DNA methylation at the DKK1 promoter was not affected by genistein treatment in all the cell lines tested. On the other hand, genistein induced histone H3 acetylation of the DKK1 promoter region in SW480 and HCT15 cells. This indicates that increased histone acetylation is associated with the genistein-induced DKK1 expression. The association between histone acetylation and DKK1 gene expression is confirmed by the histone deacetylase inhibitor trichostatin A (TSA) treatment. In conclusion, genistein treatment decreases cell growth and proliferation in colon cancer cell lines. The effect is associated with the increased DKK1 expression through the induction of histone acetylation at the DKK1 promoter region.

Indexed as

Gene Expression Regulation, NeoplasticAcetylationAnticarcinogenic AgentsCell Line, TumorColonic NeoplasmsDNA MethylationDose-Response Relationship, DrugGene Expression ProfilingGenisteinHistonesHumansIntercellular Signaling Peptides and ProteinsPromoter Regions, GeneticRNA, Small InterferingTime FactorsAnticarcinogenic AgentsDKK1 protein, humanGenisteinHistonesIntercellular Signaling Peptides and ProteinsRNA, Small Interfering

Identifiers

PMID22815877
PMCPMC3399800
OpenAlexW2098238843

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.