Evidence map›Paper›PMID 22815472›Full record

ArticleThe Journal of biological chemistry2012

UDP-glucose dehydrogenase polymorphisms from patients with congenital heart valve defects disrupt enzyme stability and quaternary assembly.

Annastasia S Hyde, Erin L Farmer, Katherine E Easley, Kristy van Lammeren, Vincent M Christoffels, Joseph J Barycki, Jeroen Bakkers, Melanie A Simpson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Review
  3. Biallelic mutations inGenes & diseases · 2023
    Article
  4. Review
  5. Article
  6. Integration of Sugar Metabolism and Proteoglycan Synthesis by UDP-glucose Dehydrogenase.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2021
    Review
  7. A Missense Mutation in theFrontiers in pediatrics · 2020
    Article
  8. Zebrafish models of cardiovascular disease.Heart failure reviews · 2016
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Annastasia S HydeDepartment of Biochemistry, University of Nebraska, Lincoln, Nebraska 68588-0664, USA.
Erin L Farmer
Katherine E Easley
Kristy van Lammeren
Vincent M Christoffels
Joseph J Barycki
Jeroen Bakkers
Melanie A Simpson
University of Nebraska–Lincoln · USRoyal Netherlands Academy of Arts and Sciences · NLUniversity of Amsterdam · NL

Funding

SUPPRESSIVE ROLE OF TGFBETA IN METASTASIS OF COLON CANCERP20RR018759 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI JOHNSON, KEITH R · 2003 to 2011
$17.9M
Mechanisms of Hyaluronan Signaling and Turnover in Prostate CancerR01CA165574 · NCI · UNIVERSITY OF NEBRASKA LINCOLN · PI SIMPSON, MELANIE A. · 2012 to 2016
$1.6M
Structural insights into redox homeostasisR01GM077289 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI BARYCKI, JOSEPH J · 2006 to 2010
$1.4M
Role of hyaluronan matrix in prostate cancer progressionR01CA106584 · NCI · UNIVERSITY OF NEBRASKA LINCOLN · PI SIMPSON, MELANIE A. · 2005 to 2010
$1.1M
NCI NIH HHS CA106584NCI NIH HHS R01 CA106584NCI NIH HHS R01 CA165574NCRR NIH HHS P20 RR018759NIGMS NIH HHS R01 GM077289
6 · The paper itself

Abstract

Cardiac valve defects are a common congenital heart malformation and a significant clinical problem. Defining molecular factors in cardiac valve development has facilitated identification of underlying causes of valve malformation. Gene disruption in zebrafish revealed a critical role for UDP-glucose dehydrogenase (UGDH) in valve development, so this gene was screened for polymorphisms in a patient population suffering from cardiac valve defects. Two genetic substitutions were identified and predicted to encode missense mutations of arginine 141 to cysteine and glutamate 416 to aspartate, respectively. Using a zebrafish model of defective heart valve formation caused by morpholino oligonucleotide knockdown of UGDH, transcripts encoding the UGDH R141C or E416D mutant enzymes were unable to restore cardiac valve formation and could only partially rescue cardiac edema. Characterization of the mutant recombinant enzymes purified from Escherichia coli revealed modest alterations in the enzymatic activity of the mutants and a significant reduction in the half-life of enzyme activity at 37 °C. This reduction in activity could be propagated to the wild-type enzyme in a 1:1 mixed reaction. Furthermore, the quaternary structure of both mutants, normally hexameric, was destabilized to favor the dimeric species, and the intrinsic thermal stability of the R141C mutant was highly compromised. The results are consistent with the reduced function of both missense mutations significantly reducing the ability of UGDH to provide precursors for cardiac cushion formation, which is essential to subsequent valve formation. The identification of these polymorphisms in patient populations will help identify families genetically at risk for valve defects.

Indexed as

Mutation, MissensePolymorphism, GeneticAmino Acid SubstitutionAnimalsAnimals, Genetically ModifiedEnzyme StabilityEscherichia coliHeart Defects, CongenitalHeart Valve DiseasesHeart ValvesMuscle ProteinsProtein Structure, QuaternaryRecombinant ProteinsUridine Diphosphate Glucose DehydrogenaseZebrafishZebrafish ProteinsMuscle ProteinsRecombinant ProteinsUridine Diphosphate Glucose DehydrogenaseZebrafish Proteins

Identifiers

PMID22815472
PMCPMC3463334
OpenAlexW2049639243

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.