Evidence map›Paper›PMID 22815446›Full record

ArticleJournal of bacteriology2012

Draft genome sequence of the sulfur-oxidizing bacterium "Candidatus Sulfurovum sediminum" AR, which belongs to the Epsilonproteobacteria.

Soo-Je Park, Rohit Ghai, Ana-Belén Martín-Cuadrado, Francisco Rodríguez-Valera, Man-Young Jung, Jong-Geol Kim, Sung-Keun Rhee

Abstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Genomic Evidence for Formate Metabolism byApplied and environmental microbiology · 2020
    Article
  3. Article
  4. Article
  5. Article
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  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Soo-Je ParkDepartment of Microbiology, Chungbuk National University, Cheongju, Chungbuk, Republic of Korea.
Rohit Ghai
Ana-Belén Martín-Cuadrado
Francisco Rodríguez-Valera
Man-Young Jung
Jong-Geol Kim
Sung-Keun Rhee

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sulfur-oxidizing bacteria are common microorganisms in a variety of sulfide-rich environments. They play important roles in the global sulfur cycle on earth. Here, we present a high-quality draft genome sequence of a sulfur-oxidizing bacterium, "Candidatus Sulfurovum sediminum" strain AR, which belongs to the class Epsilonproteobacteria and dominated an enrichment culture from a marine sediment collected off Svalbard, within the Arctic Circle. Its genome contains genes for sulfur oxidation and carbon fixation. The size of the draft genome is 2.12 Mb, and the G+C content is 39.4%.

Indexed as

Genome, BacterialSequence Analysis, DNABase CompositionDNA, BacterialEpsilonproteobacteriaGeologic SedimentsMolecular Sequence DataOxidation-ReductionSulfurSvalbardDNA, BacterialSulfur

Identifiers

PMID22815446
PMCPMC3416546

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.