Evidence map›Paper›PMID 22814503›Full record

ArticleJournal of microbiology and biotechnology2012

A fusion tag to fold on: the S-layer protein SgsE confers improved folding kinetics to translationally fused enhanced green fluorescent protein.

Robin Ristl, Birgit Kainz, Gerhard Stadlmayr, Heinrich Schuster, Dietmar Pum, Paul Messner, Christian Obinger, Christina Schaffer

Open access · greenAbstract read
In one paragraph

Article in Journal of microbiology and biotechnology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 82% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Robin RistlDepartment of NanoBiotechnology, Vienna Institute of BioTechnology, University fur Bodenkultur Wien, Vienna, Austria.
Birgit Kainz
Gerhard Stadlmayr
Heinrich Schuster
Dietmar Pum
Paul Messner
Christian Obinger
Christina Schaffer
BOKU University · AT

Funding

Austrian Science Fund FWF P 19047Austrian Science Fund FWF P 21954Austrian Science Fund FWF P 22791Austrian Science Fund FWF W 1224
6 · The paper itself

Abstract

Genetic fusion of two proteins frequently induces beneficial effects to the proteins, such as increased solubility, besides the combination of two protein functions. Here, we study the effects of the bacterial surface layer protein SgsE from Geobacillus stearothermophilus NRS 2004/3a on the folding of a C-terminally fused enhanced green fluorescent protein (EGFP) moiety. Although GFPs are generally unable to adopt a functional confirmation in the bacterial periplasm of Escherichia coli cells, we observed periplasmic fluorescence from a chimera of a 150-amino-acid N-terminal truncation of SgsE and EGFP. Based on this finding, unfolding and refolding kinetics of different S-layer-EGFP chimeras, a maltose binding protein-EGFP chimera, and sole EGFP were monitored using green fluorescence as indicator for the folded protein state. Calculated apparent rate constants for unfolding and refolding indicated different folding pathways for EGFP depending on the fusion partner used, and a clearly stabilizing effect was observed for the SgsE_C fusion moiety. Thermal stability, as determined by differential scanning calorimetry, and unfolding equilibria were found to be independent of the fused partner. We conclude that the stabilizing effect SgsE_C exerts on EGFP is due to a reduction of degrees of freedom for folding of EGFP in the fused state.

Indexed as

Bacterial ProteinsCalorimetry, Differential ScanningEscherichia coliGeobacillus stearothermophilusGreen Fluorescent ProteinsKineticsMaltose-Binding ProteinsMembrane GlycoproteinsPeriplasmProtein FoldingRecombinant Fusion ProteinsBacterial ProteinsGreen Fluorescent ProteinsMaltose-Binding ProteinsMembrane GlycoproteinsRecombinant Fusion ProteinsS-layer proteins

Identifiers

PMID22814503
PMCPMC4394153
OpenAlexW2322002717

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.