Evidence map›Paper›PMID 22814268›Full record

ArticleGenomics2012

Whole-genome gene expression profiling reveals the major role of nitric oxide in mediating the cellular transcriptional response to ionizing radiation in normal human fibroblasts.

Mykyta V Sokolov, Igor G Panyutin, Ronald D Neumann

Open access · greenAbstract readComparative Study
In one paragraph

Article in Genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mykyta V SokolovNuclear Medicine Division, Department of Radiology and Imaging Sciences, Clinical Center, National Institutes of Health, Bethesda, MD 20892, USA. sokolovm@mail.nih.gov
Igor G Panyutin
Ronald D Neumann
National Institutes of Health Clinical Center · US

Funding

Gene-targetted RadiotherapyZ01CL060001 · CLC · CLINICAL CENTER · PI NEUMANN, RONALD · 1997 to 2008
$1.9M
Gene-targetted RadiotherapyZIACL060001 · CLC · CLINICAL CENTER · PI NEUMANN, RONALD · 2009 to 2012
$0k
Intramural NIH HHS Z01 CL060001Intramural NIH HHS Z99 CL999999
6 · The paper itself

Abstract

The indirect biological effects of ionizing radiation (IR) are thought to be mediated largely by reactive oxygen and nitrogen species (ROS and RNS). However, no data are available on how nitric oxide (NO) modulates the response of normal human cells to IR exposures at the level of the whole transcriptome. Here, we examined the effects of NO and ROS scavengers, carboxy-PTIO and DMSO, on changes in global gene expression in cultured normal human fibroblasts after exposures to gamma-rays, aiming to elucidate the involvement of ROS and RNS in transcriptional response to IR. We found that NO depletion dramatically affects the gene expression in normal human cells following irradiation with gamma-rays. We observed striking (more than seven-fold) reduction of the number of upregulated genes upon NO scavenging compared to reference irradiated cell cultures. NO scavenging in irradiated IMR-90 cells results in induction of p53 signaling, DNA damage and DNA repair pathways.

Indexed as

Gamma RaysBenzoatesCell LineDimethyl SulfoxideFibroblastsFree Radical ScavengersGene Expression ProfilingGene Expression RegulationGenome, HumanHumansImidazolesNitric OxideOligonucleotide Array Sequence AnalysisTranscription, Genetic1,3-dihydroxy-4,4,5,5-tetramethyl-2-(4-carboxyphenyl)tetrahydroimidazoleBenzoatesDimethyl SulfoxideFree Radical ScavengersImidazolesNitric Oxide

Identifiers

PMID22814268
PMCPMC3483410
OpenAlexW2084972632

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.