Evidence map›Paper›PMID 22811533›Full record

ArticleJournal of virology2012

Spread of a distinct Stx2-encoding phage prototype among Escherichia coli O104:H4 strains from outbreaks in Germany, Norway, and Georgia.

Lothar Beutin, Jens Andre Hammerl, Eckhard Strauch, Jochen Reetz, Ralf Dieckmann, Ylanna Kelner-Burgos, Annett Martin, Angelika Miko, Nancy A Strockbine, Björn Arne Lindstedt and 6 more

Abstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Genomic structure ofMicrobial genomics · 2026
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  8. Review
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  11. Whole genome sequencing reveals high clonal diversity ofAntimicrobial resistance and infection control · 2018
    Article
  12. Non-pathogenicFrontiers in microbiology · 2018
    Article
  13. The Mobilome; A Major Contributor toFrontiers in microbiology · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Lothar BeutinFederal Institute for Risk Assessment, Department of Biological Safety, Berlin, Germany. lothar.beutin@bfr.bund.de
Jens Andre Hammerl
Eckhard Strauch
Jochen Reetz
Ralf Dieckmann
Ylanna Kelner-Burgos
Annett Martin
Angelika Miko
Nancy A Strockbine
Björn Arne Lindstedt
Detlef Horn
Hella Monse
Bruno Huettel
Ines Müller
Kurt Stüber
Richard Reinhardt

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shiga toxin 2 (Stx2)-producing Escherichia coli (STEC) O104:H4 caused one of the world's largest outbreaks of hemorrhagic colitis and hemolytic uremic syndrome in Germany in 2011. These strains have evolved from enteroaggregative E. coli (EAEC) by the acquisition of the Stx2 genes and have been designated enteroaggregative hemorrhagic E. coli. Nucleotide sequencing has shown that the Stx2 gene is carried by prophages integrated into the chromosome of STEC O104:H4. We studied the properties of Stx2-encoding bacteriophages which are responsible for the emergence of this new type of E. coli pathogen. For this, we analyzed Stx bacteriophages from STEC O104:H4 strains from Germany (in 2001 and 2011), Norway (2006), and the Republic of Georgia (2009). Viable Stx2-encoding bacteriophages could be isolated from all STEC strains except for the Norwegian strain. The Stx2 phages formed lysogens on E. coli K-12 by integration into the wrbA locus, resulting in Stx2 production. The nucleotide sequence of the Stx2 phage P13374 of a German STEC O104:H4 outbreak was determined. From the bioinformatic analyses of the prophage sequence of 60,894 bp, 79 open reading frames were inferred. Interestingly, the Stx2 phages from the German 2001 and 2011 outbreak strains were found to be identical and closely related to the Stx2 phages from the Georgian 2009 isolates. Major proteins of the virion particles were analyzed by mass spectrometry. Stx2 production in STEC O104:H4 strains was inducible by mitomycin C and was compared to Stx2 production of E. coli K-12 lysogens.

Indexed as

AdultAmino Acid SequenceBacteriophagesChildEscherichia coliFemaleGeorgia (Republic)GermanyHumansLysogenyMaleMass SpectrometryMicroscopy, Electron, TransmissionMitomycinMolecular Sequence DataMyoviridaeMitomycinShiga Toxin 2

Identifiers

PMID22811533
PMCPMC3457275

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.