Evidence map›Paper›PMID 22811271›Full record

ArticleThe International journal of developmental biology2012

Expression of Sox family genes in early lamprey development.

Benjamin R Uy, Marcos Simoes-Costa, Tatjana Sauka-Spengler, Marianne E Bronner

Abstract read
In one paragraph

Article in The International journal of developmental biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Axonal Ensheathment in the Nervous System of Lamprey: Implications for the Evolution of Myelinating Glia.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Benjamin R UyDivision of Biology, California Institute of Technology, Pasadena, CA 91125, USA.
Marcos Simoes-Costa
Tatjana Sauka-Spengler
Marianne E Bronner

Funding

Evolutionary Origin of Vertebrate Neural Crest Gene NetworksR01DE017911 · NIDCR · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI BRONNER, MARIANNE · 2007 to 2011
$2.7M
Regulatory Changes Mediating Emergence of Novel Neural Crest TraitsR01NS086907 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI BRONNER, MARIANNE · 2014 to 2018
$1.8M
Medical Research Council G0902418NIDCR NIH HHS DE017911NIDCR NIH HHS R01 DE017911NINDS NIH HHS R01 NS086907
6 · The paper itself

Abstract

Members of the Sox (Sry-related high mobility group box) family of transcription factors play a variety of roles during development of both vertebrates and invertebrates. A marked expansion in gene number occurred during the emergence of vertebrates, apparently via gene duplication events that are thought to have facilitated new functions. By screening a macroarrayed library as well as the lamprey genome, we have isolated genes of the Sox B, D, E and F subfamilies in the basal jawless vertebrate, lamprey. The expression patterns of all identified Sox genes were examined from gastrulation through early organogenesis (embryonic day 4-14), with particular emphasis on the neural crest, a vertebrate innovation. Coupled with phylogenetic analysis of these Sox genes, the results provide insight into gene duplication and di-vergence in paralog deployment occurring during early vertebrate evolution.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsEmbryo, NonmammalianEvolution, MolecularIn Situ HybridizationLampreysNeural CrestPhylogenyReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerSOX Transcription FactorsRNA, MessengerSOX Transcription Factors

Identifiers

PMID22811271
PMCPMC4118928

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.