Evidence map›Paper›PMID 22808194›Full record

ArticlePloS one2012

Ecdysone induced gene expression is associated with acetylation of histone H3 lysine 23 in Drosophila melanogaster.

László Bodai, Nóra Zsindely, Renáta Gáspár, Ildikó Kristó, Orbán Komonyi, Imre Miklós Boros

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.9field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

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  8. Epigenetic regulation of post-embryonic development.Current opinion in insect science · 2021
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  11. Histone deacetylase 1 suppresses Krüppel homolog 1 gene expression and influences juvenile hormone action inProceedings of the National Academy of Sciences of the United States of America · 2019
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  15. Histone H3 lysine 23 acetylation is associated with oncogene TRIM24 expression and a poor prognosis in breast cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

László BodaiDepartment of Biochemistry and Molecular Biology, University of Szeged, Szeged, Hungary. lbodai@yahoo.com
Nóra Zsindely
Renáta Gáspár
Ildikó Kristó
Orbán Komonyi
Imre Miklós Boros
University of Szeged · HUHungarian Academy of Sciences · HUInstitut de génétique et de biologie moléculaire et cellulaire · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Posttranslational modification of histones regulates transcription but the exact role that acetylation of specific lysine residues plays in biological processes in vivo is still not clearly understood. To assess the contribution of different histone modifications to transcriptional activation in vivo, we determined the acetylation patterns on the ecdysone induced Eip74EF and Eip75B genes in Drosophila melanogaster larvae by chromatin immunoprecipitation. We found that acetylation of histone H3 lysine 23 is localized to promoters and correlates with endogenous ecdysone induced gene activation. In contrast, acetylation of lysines 8, 12 and 16 of histone H4 and lysine 9 of histone H3 showed minor differences in their distribution on the regulatory and transcribed regions tested, and had limited or no correlation with ecdysone induced transcriptional activity. We found that dCBP, which is encoded by the nejire gene, acetylates H3 lysine 23 in vivo, and silencing of nejire leads to reduced expression of the Eip74EF and Eip75B genes. Our results suggest that acetylation of specific lysine residues of histones contribute specifically to the dynamic regulation of transcription. Furthermore, along with previous studies identify CBP dependent H3 lysine 23 acetylation as an evolutionarily conserved chromatin modification involved in steroid induced gene activation.

Indexed as

AcetylationAcetyltransferasesAnimalsDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsEcdysoneGene Expression RegulationGenes, InsectHistonesLarvaLysineModels, Geneticp300-CBP Transcription FactorsPromoter Regions, GeneticProtein Processing, Post-TranslationalAcetyltransferasesDNA-Binding ProteinsDrosophila ProteinsEcdysoneEip74EF protein, DrosophilaEip75B protein, DrosophilaHistonesLysinenej protein, Drosophilap300-CBP Transcription FactorsTranscription Factors

Identifiers

PMID22808194
PMCPMC3393682
OpenAlexW2063077024

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.