Evidence map›Paper›PMID 22808021›Full record

ArticlePloS one2012

Recombinant expression and purification of T4 phage Hoc, Soc, gp23, gp24 proteins in native conformations with stability studies.

Paulina Miernikiewicz, Barbara Owczarek, Agnieszka Piotrowicz, Barbara Boczkowska, Kamila Rzewucka, Grzegorz Figura, Andrey Letarov, Eugene Kulikov, Agnieszka Kopciuch, Kinga Switała-Jeleń and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Paulina MiernikiewiczInstitute of Immunology and Experimental Therapy, Polish Academy of Sciences, Wroclaw, Poland.
Barbara Owczarek
Agnieszka Piotrowicz
Barbara Boczkowska
Kamila Rzewucka
Grzegorz Figura
Andrey Letarov
Eugene Kulikov
Agnieszka Kopciuch
Kinga Switała-Jeleń
Anna Oślizło
Katarzyna Hodyra
Jerzy Gubernator
Krystyna Dąbrowska
Ludwik Hirszfeld Institute of Immunology and Experimental Therapy · PLPolish Academy of Sciences · PLRussian Academy of Sciences · RUUniversity of Wrocław · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the biological activity of bacteriophage particles is essential for rational design of bacteriophages with defined pharmacokinetic parameters and to identify the mechanisms of immunobiological activities demonstrated for some bacteriophages. This work requires highly purified preparations of the individual phage structural proteins, possessing native conformation that is essential for their reactivity, and free of incompatible biologically active substances such as bacterial lipopolysaccharide (LPS). In this study we describe expression in E. coli and purification of four proteins forming the surface of the bacteriophage T4 head: gp23, gp24, gphoc and gpsoc. We optimized protein expression using a set of chaperones for effective production of soluble proteins in their native conformations. The assistance of chaperones was critical for production of soluble gp23 (chaperone gp31 of T4 phage) and of gpsoc (chaperone TF of E. coli). Phage head proteins were purified in native conditions by affinity chromatography and size-exclusion chromatography. Two-step LPS removal allowed immunological purity grade with the average endotoxin activity less than 1 unit per ml of protein preparation. The secondary structure and stability of the proteins were studied using circular dichroism (CD) spectrometry, which confirmed that highly purified proteins preserve their native conformations. In increasing concentration of a denaturant (guanidine hydrochloride), protein stability was proved to increase as follows: gpsoc, gp23, gphoc. The denaturation profile of gp24 protein showed independent domain unfolding with the most stable larger domain. The native purified recombinant phage proteins obtained in this work were shown to be suitable for immunological experiments in vivo and in vitro.

Indexed as

Bacteriophage T4CapsidCapsid ProteinsChromatography, AffinityChromatography, GelCircular DichroismEscherichia coliGene ExpressionLipopolysaccharidesMolecular ChaperonesProtein StabilityProtein Structure, SecondaryProtein Structure, TertiaryRecombinant Fusion ProteinsCapsid Proteinsgene 24 protein, Enterobacteria phage T4gp23 protein, Bacteriophage T4HOC protein, T4 phageLipopolysaccharidesMolecular ChaperonesRecombinant Fusion Proteinssmall outer capsid protein, bacteriophage T4

Identifiers

PMID22808021
PMCPMC3396610
OpenAlexW2079337303

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.