Evidence map›Paper›PMID 22808006›Full record

Trial reportPloS one2012

Metabolomics reveals amino acids contribute to variation in response to simvastatin treatment.

Miles Trupp, Hongjie Zhu, William R Wikoff, Rebecca A Baillie, Zhao-Bang Zeng, Peter D Karp, Oliver Fiehn, Ronald M Krauss, Rima Kaddurah-Daouk

Registry-linked trialOpen access · goldAbstract readRandomized Controlled Trial
In one paragraph

Trial report in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It reports registered trial NCT00451828. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00451828 phase4completed

Cholesterol and Pharmacogenetic Study

Ran2002Enrolled1,000Registered outcomes11Posted comparisons0ConditionsCardiovascular Disease, Coronary Heart Disease, Hypercholesterolemia, HyperlipidemiaArmssimvastatin
PMID 16516587other papers from this trial
Open the trial in the graph
3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 99 citations in OpenAlex.

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  13. Sex differences in the human metabolome.Biology of sex differences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Miles TruppBioinformatics Research Group, AI Center, SRI International, Menlo Park, California, United States of America.
Hongjie Zhu
William R Wikoff
Rebecca A Baillie
Zhao-Bang Zeng
Peter D Karp
Oliver Fiehn
Ronald M Krauss
Rima Kaddurah-Daouk
Duke Medical Center · USSRI International · USUniversity of California, Davis · USNorth Carolina State University · USRosa (United States) · US

Funding

Pharmacogenomics and Risk of Cardiovascular DiseaseU01HL069757 · NHLBI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI KRAUSS, RONALD M · 2001 to 2009
$24.7M
Metabolomics Network for Drug Response PhenotypeR24GM078233 · NIGMS · DUKE UNIVERSITY · PI KADDURAH-DAOUK, RIMA F · 2007 to 2010
$2.1M
NHLBI NIH HHS U01 HL069757NIGMS NIH HHS R24 GM078233NIGMS NIH HHS R24, GM078233
6 · The paper itself

Abstract

unlabelledStatins are widely prescribed for reducing LDL-cholesterol (C) and risk for cardiovascular disease (CVD), but there is considerable variation in therapeutic response. We used a gas chromatography-time-of-flight mass-spectrometry-based metabolomics platform to evaluate global effects of simvastatin on intermediary metabolism. Analyses were conducted in 148 participants in the Cholesterol and Pharmacogenetics study who were profiled pre and six weeks post treatment with 40 mg/day simvastatin: 100 randomly selected from the full range of the LDL-C response distribution and 24 each from the top and bottom 10% of this distribution ("good" and "poor" responders, respectively). The metabolic signature of drug exposure in the full range of responders included essential amino acids, lauric acid (p<0.0055, q<0.055), and alpha-tocopherol (p<0.0003, q<0.017). Using the HumanCyc database and pathway enrichment analysis, we observed that the metabolites of drug exposure were enriched for the pathway class amino acid degradation (p<0.0032). Metabolites whose change correlated with LDL-C lowering response to simvastatin in the full range responders included cystine, urea cycle intermediates, and the dibasic amino acids ornithine, citrulline and lysine. These dibasic amino acids share plasma membrane transporters with arginine, the rate-limiting substrate for nitric oxide synthase (NOS), a critical mediator of cardiovascular health. Baseline metabolic profiles of the good and poor responders were analyzed by orthogonal partial least square discriminant analysis so as to determine the metabolites that best separated the two response groups and could be predictive of LDL-C response. Among these were xanthine, 2-hydroxyvaleric acid, succinic acid, stearic acid, and fructose. Together, the findings from this study indicate that clusters of metabolites involved in multiple pathways not directly connected with cholesterol metabolism may play a role in modulating the response to simvastatin treatment.

trial registrationClinicalTrials.gov NCT00451828.

Indexed as

MetabolomicsAdultalpha-TocopherolAmino Acids, EssentialBiomarkers, PharmacologicalCholesterol, LDLCitrullineCystineFemaleFructoseGas Chromatography-Mass SpectrometryHumansHydroxymethylglutaryl-CoA Reductase InhibitorsLauric AcidsMaleNitric Oxide Synthasealpha-TocopherolAmino Acids, EssentialBiomarkers, PharmacologicalCholesterol, LDLCitrullineCystineFructoseHydroxymethylglutaryl-CoA Reductase Inhibitorslauric acidLauric AcidsNitric Oxide SynthaseOrnithineSimvastatinstearic acidStearic AcidsSuccinic AcidXanthine

Identifiers

PMID22808006
PMCPMC3392268
OpenAlexW2021939681

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.