Evidence map›Paper›PMID 22806143›Full record

ArticleMolecular systems biology2012

Global biogeography of SAR11 marine bacteria.

Mark V Brown, Federico M Lauro, Matthew Z DeMaere, Les Muir, David Wilkins, Torsten Thomas, Martin J Riddle, Jed A Fuhrman, Cynthia Andrews-Pfannkoch, Jeffrey M Hoffman and 4 more

Open access · goldAbstract read
In one paragraph

Article in Molecular systems biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 115 papers.

0numbers the graph read from it
0cells of the map it votes in
115citing papers in PubMed
18.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

115 citing papers in PubMed, 271 citations in OpenAlex.

  1. Article
  2. Article
  3. Taxonomic and biosynthetic diversity of the marine actinomyceteApplied and environmental microbiology · 2026
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  14. Ecological associations distribution modelling of marine plankton at a global scale.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Article
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55 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Mark V BrownSchool of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, New South Wales, Australia.
Federico M Lauro
Matthew Z DeMaere
Les Muir
David Wilkins
Torsten Thomas
Martin J Riddle
Jed A Fuhrman
Cynthia Andrews-Pfannkoch
Jeffrey M Hoffman
Jeffrey B McQuaid
Andrew Allen
Stephen R Rintoul
Ricardo Cavicchioli
UNSW Sydney · AUJ. Craig Venter Institute · USAntarctic Climate and Ecosystems Cooperative Research Centre · AUAustralian Antarctic Division · AUCSIRO Oceans and Atmosphere · AUUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ubiquitous SAR11 bacterial clade is the most abundant type of organism in the world's oceans, but the reasons for its success are not fully elucidated. We analysed 128 surface marine metagenomes, including 37 new Antarctic metagenomes. The large size of the data set enabled internal transcribed spacer (ITS) regions to be obtained from the Southern polar region, enabling the first global characterization of the distribution of SAR11, from waters spanning temperatures -2 to 30°C. Our data show a stable co-occurrence of phylotypes within both 'tropical' (>20°C) and 'polar' (<10°C) biomes, highlighting ecological niche differentiation between major SAR11 subgroups. All phylotypes display transitions in abundance that are strongly correlated with temperature and latitude. By assembling SAR11 genomes from Antarctic metagenome data, we identified specific genes, biases in gene functions and signatures of positive selection in the genomes of the polar SAR11-genomic signatures of adaptive radiation. Our data demonstrate the importance of adaptive radiation in the organism's ability to proliferate throughout the world's oceans, and describe genomic traits characteristic of different phylotypes in specific marine biomes.

Indexed as

Models, BiologicalAlphaproteobacteriaAntarctic RegionsClimateGenome, BacterialMarine BiologyMetagenomePhylogenyPhylogeographySeawaterSequence AlignmentTemperature

Identifiers

PMID22806143
PMCPMC3421443
OpenAlexW2117967880

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.