Evidence map›Paper›PMID 22805760›Full record

ArticleEpigenetics2012

The TCF4/β-catenin pathway and chromatin structure cooperate to regulate D-glucuronyl C5-epimerase expression in breast cancer.

Luydmila A Mostovich, Tatiana Y Prudnikova, Aleksandr G Kondratov, Natalya V Gubanova, Olga A Kharchenko, Olesya S Kutsenko, Pavel V Vavilov, Klas Haraldson, Vladimir I Kashuba, Ingemar Ernberg and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Prognostic value ofHeliyon · 2023
    Article
  3. Article
  4. Review
  5. D-glucuronyl C5-epimerase cell type specifically affects angiogenesis pathway in different prostate cancer cells.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 5 countries.

Luydmila A MostovichInstitute of Molecular Biology and Biophysics SB RAMS, Novosibirsk, Russia.
Tatiana Y Prudnikova
Aleksandr G Kondratov
Natalya V Gubanova
Olga A Kharchenko
Olesya S Kutsenko
Pavel V Vavilov
Klas Haraldson
Vladimir I Kashuba
Ingemar Ernberg
Eugene R Zabarovsky
Elvira V Grigorieva
Institute of Molecular Biology and Biophysics · RUKarolinska Institutet · SEInstitute of Cytology and Genetics · RUInstitute of Molecular Biology and Genetics · UAInstituto de Biomedicina y Genética Molecular de Valladolid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

D-glucuronyl C5-epimerase (GLCE) is a potential tumor-suppressor gene involved in heparan sulfate biosynthesis. GLCE expression is significantly decreased in breast tumors; however, the underlying molecular mechanisms remain unclear. This study examined the possible epigenetic mechanisms for GLCE inactivation in breast cancer. Very little methylation of the GLCE promoter region was detected in breast tumors in vivo and in breast cancer cells (MCF7 and T47D) in vitro and GLCE expression in breast cancer cells was not altered by 5-deoxyazacytidine (5-aza-dC) treatment, suggesting that promoter methylation is not involved in regulating GLCE expression. Chromatin activation by Trichostatin A (TSA) or 5-aza-dC/TSA treatment increased GLCE expression by two to 3-fold due to an increased interaction between the GLCE promoter and the TCF4/β-catenin transactivation complex, or H3K9ac and H3K4Me3 histone modifications. However, ectopic expression of TCF4/β-catenin was not sufficient to activate GLCE expression in MCF7 cells, suggesting that chromatin structure plays a key role in GLCE regulation. Although TSA treatment significantly repressed canonical WNT signaling in MCF7 cells, it did not influence endogenous TCF4/β-catenin mRNA levels and activated TCF4/β-catenin-driven transcription from the GLCE promoter, indicating GLCE as a novel target for TCF4/β-catenin complex in breast cancer cells. A correlation was observed between GLCE, TCF4 and β-catenin expression in breast cancer cells and primary tumors, suggesting an important role for TCF4/β-catenin in regulating GLCE expression both in vitro and in vivo. Taken together, the results indicate that GLCE expression in breast cancer is regulated by a combination of chromatin structure and TCF4/β-catenin complex activity.

Indexed as

Gene Expression Regulation, NeoplasticAntimetabolites, AntineoplasticAzacitidineBasic Helix-Loop-Helix Leucine Zipper Transcription Factorsbeta CateninBreast NeoplasmsCarbohydrate EpimerasesChromatinDecitabineDNA MethylationEpigenesis, GeneticFemaleHistone Deacetylase InhibitorsHistonesHumansHydroxamic AcidsAntimetabolites, AntineoplasticAzacitidineBasic Helix-Loop-Helix Leucine Zipper Transcription Factorsbeta CateninCarbohydrate EpimerasesChromatinCTNNB1 protein, humanDecitabineheparosan N-sulfate D-glucuronosyl 5-epimeraseHistone Deacetylase InhibitorsHistonesHydroxamic AcidsTCF4 protein, humanTranscription Factor 4Transcription Factorstrichostatin A

Identifiers

PMID22805760
PMCPMC3427288
OpenAlexW2166916327

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.