ArticleGenetics and molecular biology2012
Expression analysis in response to drought stress in soybean: Shedding light on the regulation of metabolic pathway genes.
Article in Genetics and molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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21 citing papers in PubMed, 40 citations in OpenAlex.
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- Nutritional and antioxidant profiles of blackberry and raspberry genotypes.BMC plant biology · 2025Article
- MYB transcription factors, their regulation and interactions with non-coding RNAs during drought stress in Brassica juncea.BMC plant biology · 2024Article
- Achieving agricultural sustainability through soybean production in Iran: Potential and challenges.Heliyon · 2024Review
- Key Soybean Seedlings Drought-Responsive Genes and Pathways Revealed by Comparative Transcriptome Analyses of Two Cultivars.International journal of molecular sciences · 2022Article
- ACC deaminase-producing endophytic fungal consortia promotes drought stress tolerance inFrontiers in plant science · 2022Article
- Evolutionary and Regulatory Pattern Analysis of Soybean CaFrontiers in plant science · 2022Article
- Compositional analysis of soybean event IND-ØØ41Ø-5.GM crops & food · 2020Article
- Genome-wide association study of soybean seed germination under drought stress.Molecular genetics and genomics : MGG · 2020Article
- Identification of drought tolerant genotypes using physiological traits in soybean.Physiology and molecular biology of plants : an international journal of functional plant biology · 2019Article
- A reference-grade wild soybean genome.Nature communications · 2019Article
- RETRACTED: Genome-wide identification of RETINOBLASTOMA RELATED 1 binding sites in Arabidopsis reveals novel DNA damage regulators.PLoS genetics · 2018Article
- Whole Genome Analysis of Cyclin Dependent Kinase (International journal of molecular sciences · 2018Article
- A Dehydration-Induced Eukaryotic Translation Initiation Factor iso4G Identified in a Slow Wilting Soybean Cultivar Enhances Abiotic Stress Tolerance inFrontiers in plant science · 2018Article
- Transcriptome analysis of lentil (Lens culinaris Medikus) in response to seedling drought stress.BMC genomics · 2017Article
- Isolation and characterization of a promoter responsive to salt, osmotic and dehydration stresses in soybean.Genetics and molecular biology · 2017Article
- Walking through the statistical black boxes of plant breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Review
- Histone modifications facilitate the coexpression of bidirectional promoters in rice.BMC genomics · 2016Article
- A toolbox of genes, proteins, metabolites and promoters for improving drought tolerance in soybean includes the metabolite coumestrol and stomatal development genes.BMC genomics · 2016Article
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Authors and funding
9 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Metabolomics analysis of wild type Arabidopsis thaliana plants, under control and drought stress conditions revealed several metabolic pathways that are induced under water deficit. The metabolic response to drought stress is also associated with ABA dependent and independent pathways, allowing a better understanding of the molecular mechanisms in this model plant. Through combining an in silico approach and gene expression analysis by quantitative real-time PCR, the present work aims at identifying genes of soybean metabolic pathways potentially associated with water deficit. Digital expression patterns of Arabidopsis genes, which were selected based on the basis of literature reports, were evaluated under drought stress condition by Genevestigator. Genes that showed strong induction under drought stress were selected and used as bait to identify orthologs in the soybean genome. This allowed us to select 354 genes of putative soybean orthologs of 79 Arabidopsis genes belonging to 38 distinct metabolic pathways. The expression pattern of the selected genes was verified in the subtractive libraries available in the GENOSOJA project. Subsequently, 13 genes from different metabolic pathways were selected for validation by qPCR experiments. The expression of six genes was validated in plants undergoing drought stress in both pot-based and hydroponic cultivation systems. The results suggest that the metabolic response to drought stress is conserved in Arabidopsis and soybean plants.
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