Evidence map›Paper›PMID 22802251›Full record

ArticleAntimicrobial agents and chemotherapy2012

Early strains of multidrug-resistant Salmonella enterica serovar Kentucky sequence type 198 from Southeast Asia harbor Salmonella genomic island 1-J variants with a novel insertion sequence.

Simon Le Hello, François-Xavier Weill, Véronique Guibert, Karine Praud, Axel Cloeckaert, Benoît Doublet

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Article in Antimicrobial agents and chemotherapy, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

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19citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Global genomic survey ofEmerging microbes & infections · 2025
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  2. Prevalence and Antimicrobial Resistance Diversity ofAntibiotics (Basel, Switzerland) · 2024
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  5. Genomic characterization ofFrontiers in microbiology · 2022
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  6. Genomic and Evolutionary Analysis ofFrontiers in cellular and infection microbiology · 2022
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  7. Article
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  9. Genomic Analysis of Ciprofloxacin-ResistantFrontiers in microbiology · 2021
    Article
  10. Genomic epidemiology of emerging ESBL-producingEmerging microbes & infections · 2020
    Article
  11. Antibiotic resistance inVeterinary world · 2020
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Simon Le HelloInstitut Pasteur, Unité des Bactéries Pathogènes Entériques, Centre National de Référence des Escherichia coli, Shigella et Salmonella, Paris, France.
François-Xavier Weill
Véronique Guibert
Karine Praud
Axel Cloeckaert
Benoît Doublet

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salmonella genomic island 1 (SGI1) is a 43-kb integrative mobilizable element that harbors a great diversity of multidrug resistance gene clusters described in numerous Salmonella enterica serovars and also in Proteus mirabilis. The majority of SGI1 variants contain an In104-derivative complex class 1 integron inserted between resolvase gene res and open reading frame (ORF) S044 in SGI1. Recently, the international spread of ciprofloxacin-resistant S. enterica serovar Kentucky sequence type 198 (ST198) containing SGI1-K variants has been reported. A retrospective study was undertaken to characterize ST198 S. Kentucky strains isolated before the spread of the epidemic ST198-SGI1-K population in Africa and the Middle East. Here, we characterized 12 ST198 S. Kentucky strains isolated between 1969 and 1999, mainly from humans returning from Southeast Asia (n = 10 strains) or Israel (n = 1 strain) or from meat in Egypt (n = 1 strain). All these ST198 S. Kentucky strains did not belong to the XbaI pulsotype X1 associated with the African epidemic clone but to pulsotype X2. SGI1-J subgroup variants containing different complex integrons with a partial transposition module and inserted within ORF S023 of SGI1 were detected in six strains. The SGI1-J4 variant containing a partially deleted class 1 integron and thus showing a narrow resistance phenotype to sulfonamides was identified in two epidemiologically unrelated strains from Indonesia. The four remaining strains harbored a novel SGI1-J variant, named SGI1-J6, which contained aadA2, floR2, tetR(G)-tetA(G), and sul1 resistance genes within its complex integron. Moreover, in all these S. Kentucky isolates, a novel insertion sequence related to the IS630 family and named ISSen5 was found inserted upstream of the SGI1 complex integron in ORF S023. Thus, two subpopulations of S. Kentucky ST198 independently and exclusively acquired the SGI1 during the 1980s and 1990s. Unlike the ST198-X1 African epidemic subpopulation, the ST198-X2 subpopulation mainly from Asia harbors variants of the SGI1-J subgroup that are encountered mainly in the Far East, as previously described for S. enterica serovars Emek and Virchow.

Indexed as

AfricaAsia, SoutheasternDNA Transposable ElementsDrug Resistance, Multiple, BacterialGenomic IslandsHumansIntegronsOpen Reading FramesRetrospective StudiesSalmonella entericaDNA Transposable Elements

Identifiers

PMID22802251
PMCPMC3457378

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.