Evidence map›Paper›PMID 22801371›Full record

ArticleMolecular and cellular biology2012

The hypersensitive glucocorticoid response specifically regulates period 1 and expression of circadian genes.

Timothy E Reddy, Jason Gertz, Gregory E Crawford, Michael J Garabedian, Richard M Myers

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 151 citations in OpenAlex.

  1. Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Glucocorticoids regulate the human non-coding genome.bioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Review
  9. HyperCas12a enables multiplexed CRISPRi screens.bioRxiv : the preprint server for biology · 2025
    Article
  10. Toxicology reports · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Epigenetic Mechanisms Modulated by Glucocorticoids With a Focus on Cushing Syndrome.The Journal of clinical endocrinology and metabolism · 2024
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Circadian regulation of hippocampal function is disrupted with corticosteroid treatment.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Timothy E ReddyHudsonAlpha Institute for Biotechnology, Huntsville, Alabama, USA.
Jason Gertz
Gregory E Crawford
Michael J Garabedian
Richard M Myers
HudsonAlpha Institute for Biotechnology · USDuke University · USNew York University · US

Funding

Global Annotation of Regulatory Elements in the Human GenomeU54HG004576 · NHGRI · STANFORD UNIVERSITY · PI MYERS, RICHARD M · 2007 to 2011
$21.8M
TRAINING PROGRAM IN RHEUMATIC DISEASES RESEARCHT32AR007450 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BRIDGES, S LOUIS · 1986 to 2011
$2.2M
NHGRI NIH HHS 5U54HG004576NHGRI NIH HHS U54 HG004576NIAMS NIH HHS 5T32AR007450NIAMS NIH HHS T32 AR007450
6 · The paper itself

Abstract

Glucocorticoids regulate gene expression by binding and activating the glucocorticoid receptor (GR). While ligand affinity determines the global sensitivity of the response, additional proteins act on the genome to tune sensitivity of some genes. However, the genomic extent and specificity of dose-specific glucocorticoid responses are unknown. We show that dose-specific glucocorticoid responses are extraordinarily specific at the genomic scale, able to distinctly express a single gene, the circadian rhythm gene for Period 1 (PER1), at concentrations consistent with the nighttime nadir of human cortisol. We mapped the PER1 response to a single GR binding site. The specific GR binding sequence did not impact sensitivity, and we instead attributed the response to a combination of additional transcription factors and chromatin accessibility acting in the same locus. The PER1 hypersensitive response element is conserved in the mouse, where we found similar upregulation of Per1 in pituitary cells. Targeted and transient overexpression of PER1 led to regulation of additional circadian rhythm genes hours later, suggesting that hypersensitive expression of PER1 impacts circadian gene expression. These findings show that hypersensitive GR binding occurs throughout the genome, drives targeted gene expression, and may be important to endocrine mediation of peripheral circadian rhythms.

Indexed as

Gene Expression RegulationAnimalsCell LineCell Line, TumorCircadian RhythmGlucocorticoidsHumansMicePeriod Circadian ProteinsPromoter Regions, GeneticProtein BindingReceptors, GlucocorticoidResponse ElementsTranscriptional ActivationTranscription FactorsGlucocorticoidsPER1 protein, humanPer1 protein, mousePeriod Circadian ProteinsReceptors, GlucocorticoidTranscription Factors

Identifiers

PMID22801371
PMCPMC3430195
OpenAlexW2119969731

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.