Evidence map›Paper›PMID 22798374›Full record

ArticleApplied and environmental microbiology2012

Identification of soil bacteria susceptible to TiO2 and ZnO nanoparticles.

Yuan Ge, Joshua P Schimel, Patricia A Holden

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Impact of TiOBMC microbiology · 2024
    Article
  6. Article
  7. Effects of TiOEnvironmental science and pollution research international · 2021
    Article
  8. Review
  9. Ecotoxicological effect of TiOEcotoxicology (London, England) · 2021
    Article
  10. Review
  11. Review
  12. The Response ofInternational journal of molecular sciences · 2020
    Article
  13. Exposure Route of TiONanomaterials (Basel, Switzerland) · 2020
    Review
  14. Article
  15. Article
  16. Review
  17. TiOPeerJ · 2019
    Article
  18. Soil pH effects on the toxicity of zinc oxide nanoparticles to soil microbial community.Environmental science and pollution research international · 2018
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yuan GeEarth Research Institute, University of California, Santa Barbara, Santa Barbara, California, USA.
Joshua P Schimel
Patricia A Holden

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Because soil is expected to be a major sink for engineered nanoparticles (ENPs) released to the environment, the effects of ENPs on soil processes and the organisms that carry them out should be understood. DNA-based fingerprinting analyses have shown that ENPs alter soil bacterial communities, but specific taxon changes remain unknown. We used bar-coded pyrosequencing to explore the responses of diverse bacterial taxa to two widely used ENPs, nano-TiO(2) and nano-ZnO, at various doses (0, 0.5, 1.0, and 2.0 mg g(-1) soil for TiO(2); 0.05, 0.1, and 0.5 mg g(-1) soil for ZnO) in incubated soil microcosms. These ENPs significantly altered the bacterial communities in a dose-dependent manner, with some taxa increasing as a proportion of the community, but more taxa decreasing, indicating that effects mostly reduced diversity. Some of the declining taxa are known to be associated with nitrogen fixation (Rhizobiales, Bradyrhizobiaceae, and Bradyrhizobium) and methane oxidation (Methylobacteriaceae), while some positively impacted taxa are known to be associated with the decomposition of recalcitrant organic pollutants (Sphingomonadaceae) and biopolymers including protein (Streptomycetaceae and Streptomyces), indicating potential consequences to ecosystem-scale processes. The latter was suggested by a positive correlation between protease activity and the relative abundance of Streptomycetaceae (R = 0.49, P = 0.000) and Streptomyces (R = 0.47, P = 0.000). Our results demonstrate that some metal oxide nanoparticles could affect soil bacterial communities and associated processes through effects on susceptible, narrow-function bacterial taxa.

Indexed as

NanoparticlesSoil MicrobiologyAnti-Bacterial AgentsBacteriaBiotaCluster AnalysisDNA Barcoding, TaxonomicPhylogenySequence Analysis, DNATitaniumZinc OxideAnti-Bacterial AgentsTitaniumtitanium dioxideZinc Oxide

Identifiers

PMID22798374
PMCPMC3426698

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.