Evidence map›Paper›PMID 22797727›Full record

SynthesisNature genetics2012

Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations.

Yukinori Okada, Xueling Sim, Min Jin Go, Jer-Yuarn Wu, Dongfeng Gu, Fumihiko Takeuchi, Atsushi Takahashi, Shiro Maeda, Tatsuhiko Tsunoda, Peng Chen and 39 more

Abstract readMeta-Analysis
In one paragraph

Synthesis in Nature genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 194 papers, 26 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
194citing papers in PubMed, 26 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

194 citing papers in PubMed, 26 syntheses or guidelines pooled it.

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  5. Genome-Wide Association Study for eGFR in a Taiwanese Population.Clinical journal of the American Society of Nephrology : CJASN · 2022
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  15. Journal of the American Society of Nephrology : JASN · 2017
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  18. Glycosylation Profile of IgG in Moderate Kidney Dysfunction.Journal of the American Society of Nephrology : JASN · 2016
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134 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

49 authors.

Yukinori OkadaLaboratory for Statistical Analysis, Center for Genomic Medicine (CGM), RIKEN, Yokohama, Japan. yokada@src.riken.jp
Xueling Sim
Min Jin Go
Jer-Yuarn Wu
Dongfeng Gu
Fumihiko Takeuchi
Atsushi Takahashi
Shiro Maeda
Tatsuhiko Tsunoda
Peng Chen
Su-Chi Lim
Tien-Yin Wong
Jianjun Liu
Terri L Young
Tin Aung
Mark Seielstad
Yik-Ying Teo
Young Jin Kim
Jong-Young Lee
Bok-Ghee Han
Daehee Kang
Chien-Hsiun Chen
Fuu-Jen Tsai
Li-Ching Chang
S-J Cathy Fann
Hao Mei
Dabeeru C Rao
James E Hixson
Shufeng Chen
Tomohiro Katsuya
Masato Isono
Toshio Ogihara
John C Chambers
Weihua Zhang
Jaspal S Kooner
KidneyGen Consortium
CKDGen Consortium
Eva Albrecht
GUGC consortium
Kazuhiko Yamamoto
Michiaki Kubo
Yusuke Nakamura
Naoyuki Kamatani
Norihiro Kato
Jiang He
Yuan-Tsong Chen
Yoon Shin Cho
E-Shyong Tai
Toshihiro Tanaka

Funding

CHARGE Consortium: Omics Discovery for CVD and Aging PhenotypesR01HL105756 · NHLBI · UNIVERSITY OF WASHINGTON · PI Bruce M Psaty, NICHOLAS L SMITH · 2011 to 2026
$9.5M
The Molecular Genetics of High MyopiaR01EY014685 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI YOUNG, TERRI LOIS · 2003 to 2017
$8.1M
Genetic Epidemiology of Blood Pressure InterventionU01HL072507 · NHLBI · TULANE UNIVERSITY OF LOUISIANA · PI HE, JIANG · 2002 to 2008
$7.6M
Family-Based Genome-wide Association Study for Salt-Sensitivity of Blood PressureR01HL090682 · NHLBI · TULANE UNIVERSITY OF LOUISIANA · PI HE, JIANG · 2008 to 2011
$2.8M
Sodium Sensitivity and Risk of HypertensionR01HL087263 · NHLBI · TULANE UNIVERSITY OF LOUISIANA · PI HE, JIANG · 2007 to 2011
$2.8M
Medical Research Council G0401527Medical Research Council G0700931Medical Research Council G1000143Medical Research Council MC_PC_U127561128Medical Research Council MC_U106188470Medical Research Council MC_U127527198Medical Research Council MC_U127561128Medical Research Council MC_UP_A100_1003NEI NIH HHS R01 EY014685NHLBI NIH HHS R01 HL087263NHLBI NIH HHS R01HL087263NHLBI NIH HHS R01 HL090682NHLBI NIH HHS R01HL090682NHLBI NIH HHS R01 HL105756NHLBI NIH HHS U01 HL072507NHLBI NIH HHS U01HL072507Wellcome Trust 090532
6 · The paper itself

Abstract

Chronic kidney disease (CKD), impairment of kidney function, is a serious public health problem, and the assessment of genetic factors influencing kidney function has substantial clinical relevance. Here, we report a meta-analysis of genome-wide association studies for kidney function-related traits, including 71,149 east Asian individuals from 18 studies in 11 population-, hospital- or family-based cohorts, conducted as part of the Asian Genetic Epidemiology Network (AGEN). Our meta-analysis identified 17 loci newly associated with kidney function-related traits, including the concentrations of blood urea nitrogen, uric acid and serum creatinine and estimated glomerular filtration rate based on serum creatinine levels (eGFRcrea) (P < 5.0 × 10(-8)). We further examined these loci with in silico replication in individuals of European ancestry from the KidneyGen, CKDGen and GUGC consortia, including a combined total of ∼110,347 individuals. We identify pleiotropic associations among these loci with kidney function-related traits and risk of CKD. These findings provide new insights into the genetics of kidney function.

Indexed as

Asian PeopleBlood Urea NitrogenCohort StudiesCreatinineGenetic Predisposition to DiseaseGenome-Wide Association StudyGlomerular Filtration RateHumansKidneyPolymorphism, Single NucleotideRenal Insufficiency, ChronicUric AcidCreatinineUric Acid

Identifiers

PMID22797727
PMCPMC4737645

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.