Evidence map›Paper›PMID 22792394›Full record

ArticlePloS one2012

Detection of Staphylococcus aureus delta-toxin production by whole-cell MALDI-TOF mass spectrometry.

Julie Gagnaire, Olivier Dauwalder, Sandrine Boisset, David Khau, Anne-Marie Freydière, Florence Ader, Michèle Bes, Gerard Lina, Anne Tristan, Marie-Elisabeth Reverdy and 9 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 90 citations in OpenAlex.

  1. International journal of molecular sciences · 2023
    Pooled it
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Genotypes ofToxins · 2022
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. MALDI-TOF Mass Spectroscopy Applications in Clinical Microbiology.Advances in pharmacological and pharmaceutical sciences · 2021
    Review
  15. Article
  16. Toxins · 2020
    Review
  17. Article
  18. Determination of methicillin-resistantClinical mass spectrometry (Del Mar, Calif.) · 2020
    Article
  19. Article
  20. Biofilm Formation byJournal of clinical medicine · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 1 country.

Julie GagnaireHospices Civils de Lyon, Centre National de Référence des Staphylocoques, Centre de Biologie et de Pathologie Est, Bron, France.
Olivier Dauwalder
Sandrine Boisset
David Khau
Anne-Marie Freydière
Florence Ader
Michèle Bes
Gerard Lina
Anne Tristan
Marie-Elisabeth Reverdy
Adrienne Marchand
Thomas Geissmann
Yvonne Benito
Géraldine Durand
Jean-Philippe Charrier
Jerome Etienne
Martin Welker
Alex Van Belkum
François Vandenesch
Hospices Civils de Lyon · FRbioMérieux (France) · FRInserm · FRUniversité Claude Bernard Lyon 1 · FRCentre National de la Recherche Scientifique · FRInnate Pharma (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of the present study was to detect the Staphylococcus aureus delta-toxin using Whole-Cell (WC) Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry (MS), correlate delta-toxin expression with accessory gene regulator (agr) status, and assess the prevalence of agr deficiency in clinical isolates with and without resistance to methicillin and glycopeptides. The position of the delta-toxin peak in the mass spectrum was identified using purified delta-toxin and isogenic wild type and mutant strains for agr-rnaIII, which encodes delta-toxin. Correlation between delta-toxin production and agr RNAIII expression was assessed by northern blotting. A series of 168 consecutive clinical isolates and 23 unrelated glycopeptide-intermediate S. aureus strains (GISA/heterogeneous GISA) were then tested by WC-MALDI-TOF MS. The delta-toxin peak was detected at 3005±5 Thomson, as expected for the naturally formylated delta toxin, or at 3035±5 Thomson for its G10S variant. Multivariate analysis showed that chronicity of S. aureus infection and glycopeptide resistance were significantly associated with delta-toxin deficiency (p = 0.048; CI 95%: 1.01-10.24; p = 0.023; CI 95%: 1.20-12.76, respectively). In conclusion, the S. aureus delta-toxin was identified in the WC-MALDI-TOF MS spectrum generated during routine identification procedures. Consequently, agr status can potentially predict infectious complications and rationalise application of novel virulence factor-based therapies.

Indexed as

Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationBacterial ProteinsBacterial ToxinsDrug Resistance, BacterialHumansReproducibility of ResultsStaphylococcal InfectionsStaphylococcus aureusTrans-ActivatorsVirulence FactorsAgr protein, Staphylococcus aureusBacterial ProteinsBacterial Toxinsstaphylococcal delta toxinTrans-ActivatorsVirulence Factors

Identifiers

PMID22792394
PMCPMC3391297
OpenAlexW1994724917

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.