Evidence map›Paper›PMID 22790181›Full record

ReviewCellular and molecular life sciences : CMLS2012

Emergence of symmetric protein architecture from a simple peptide motif: evolutionary models.

Michael Blaber, Jihun Lee, Liam Longo

Abstract readReview
In one paragraph

Review in Cellular and molecular life sciences : CMLS, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Peptide-RNA Coacervates as a Cradle for the Evolution of Folded Domains.Journal of the American Chemical Society · 2022
    Article
  4. Evolution of a σ-(c-di-GMP)-anti-σ switch.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Article
  6. Article
  7. Article
  8. Designs on a curve.Nature structural & molecular biology · 2015
    Article
  9. Article
  10. Computational design of a self-assembling symmetrical β-propeller protein.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  11. Article
  12. Inverted topologies in membrane proteins: a mini-review.Computational and structural biotechnology journal · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Michael BlaberDepartment of Biomedical Sciences, College of Medicine, Florida State University, 1115 West Call St., Tallahassee, FL, 32306-4300, USA, michael.blaber@med.fsu.edu.
Jihun Lee
Liam Longo

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Structural symmetry is observed in the majority of fundamental protein folds and gene duplication and fusion evolutionary processes are postulated to be responsible. However, convergent evolution leading to structural symmetry has also been proposed; additionally, there is debate regarding the extent to which exact primary structure symmetry is compatible with efficient protein folding. Issues of symmetry in protein evolution directly impact strategies for de novo protein design as symmetry can substantially simplify the design process. Additionally, when considering gene duplication and fusion in protein evolution, there are two competing models: "emergent architecture" and "conserved architecture". Recent experimental work has shed light on both the evolutionary process leading to symmetric protein folds as well as the ability of symmetric primary structure to efficiently fold. Such studies largely support a "conserved architecture" evolutionary model, suggesting that complex protein architecture was an early evolutionary achievement involving oligomerization of smaller polypeptides.

Indexed as

Protein FoldingProtein Structure, SecondaryProtein Structure, TertiaryEvolution, MolecularGene DuplicationGene FusionModels, GeneticModels, MolecularPeptidesProteinsPeptidesProteins

Identifiers

PMID22790181
PMCPMC11115074

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.