Evidence map›Paper›PMID 22788545›Full record

ArticleAnalytical chemistry2012

Direct quantification of microRNA at low picomolar level in sera of glioma patients using a competitive hybridization followed by amplified voltammetric detection.

Jianxiu Wang, Xinyao Yi, Hailin Tang, Hongxing Han, Minghua Wu, Feimeng Zhou

Abstract read
In one paragraph

Article in Analytical chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 104 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Electrochemical Genosensing of Circulating Biomarkers.Sensors (Basel, Switzerland) · 2017
    Review
  8. Article
  9. Serum microRNAs as potential noninvasive biomarkers for glioma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
  10. Review
  11. Review
  12. Extracellular vesicles shed by glioma cells: pathogenic role and clinical value.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Review
  13. Review
  14. Review
  15. Carcinogenesis of pancreatic adenocarcinoma: precursor lesions.International journal of molecular sciences · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Jianxiu WangCollege of Chemistry and Chemical Engineering, Central South University, Changsha, Hunan, People's Republic of China 410083. jxiuwang@csu.edu.cn
Xinyao Yi
Hailin Tang
Hongxing Han
Minghua Wu
Feimeng Zhou
Central South University · CNCalifornia State University Los Angeles · US

Funding

Alpha-Synuclein-Metal Complexes and Oxidative Stress in Parkinson's DiseaseSC1NS070155 · NINDS · CALIFORNIA STATE UNIVERSITY LOS ANGELES · PI ZHOU, FEIMENG · 2009 to 2012
$1.4M
NINDS NIH HHS SC1 NS070155NINDS NIH HHS SC1NS070155-01
6 · The paper itself

Abstract

MicroRNAs (miRNAs), acting as oncogenes or tumor suppressors in humans, play a key role in regulating gene expression and are believed to be important for developing novel therapeutic treatments and clinical prognoses. Due to their short lengths (17-25 nucleotides) and extremely low concentrations (typically < picomolar) in biological samples, quantification of miRNAs has been challenging to conventional biochemical methods, such as Northern blotting, microarray, and quantitative polymerase chain reaction (qPCR). In this work, a biotinylated miRNA (biotin-miRNA) whose sequence is the same as that of a miRNA target is introduced into samples of interest and allowed to compete with the miRNA target for the oligonucleotide (ODN) probe preimmobilized onto an electrode. Voltammetric quantification of the miRNA target was accomplished after complexation of the biotin-miRNA with ferrocene (Fc)-capped gold nanoparticle/streptavidin conjugates. The Fc oxidation current was found to be inversely proportional to the concentration of target miRNA between 10 fM and 2.0 pM. The method is highly reproducible (relative standard deviation (RSD) < 5%), regenerable (at least 8 regeneration/assay cycles without discernible signal decrease), and selective (with sequence specificity down to a single nucleotide mismatch). The low detection levels (10 fM or 0.1 attomoles of miRNA in a 10 μL solution) allow the direct quantification of miRNA-182, a marker correlated to the progression of glioma in patients, to be performed in serum samples without sample pretreatment and RNA extraction and enrichment. The concentration of miRNA-182 in glioma patients was found to be 3.1 times as high as that in healthy persons, a conclusion in excellent agreement with a separate qPCR measurement of the expression level. The obviations of the requirement of an internal reference in qPCR, simplicity, and cost-effectiveness are other additional advantages of this method for detection of nucleic acids in clinical samples.

Indexed as

Comparative Genomic HybridizationElectrochemical TechniquesBiotinElectrodesFerrous CompoundsGliomaGoldHumansMetallocenesMetal NanoparticlesMicroRNAsOligonucleotide ProbesStreptavidinBiotinferroceneFerrous CompoundsGoldMetallocenesMicroRNAsMirn182 microRNA, humanOligonucleotide ProbesStreptavidin

Identifiers

PMID22788545
PMCPMC3418408
OpenAlexW2009973750

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.