Evidence map›Paper›PMID 22787155›Full record

ArticleThe Journal of biological chemistry2012

DNA mismatch repair complex MutSβ promotes GAA·TTC repeat expansion in human cells.

Anasheh Halabi, Scott Ditch, Jeffrey Wang, Ed Grabczyk

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 71 citations in OpenAlex.

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  18. Replication-independent instability of Friedreich's ataxia GAA repeats during chronological aging.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Anasheh HalabiDepartment of Genetics, Health Sciences Center, Louisiana State University, New Orleans, LA 70112, USA.
Scott Ditch
Jeffrey Wang
Ed Grabczyk
Louisiana State University · USLouisiana State University Health Sciences Center New Orleans · US

Funding

Mechanisms contributing to frataxin deficiencyR01NS046567 · NINDS · LSU HEALTH SCIENCES CENTER · PI GRABCZYK, EDWARD L · 2005 to 2009
$909k
Targeting DNA mismatch repair in age-related repeat expansionF30AG042263 · NIA · LSU HEALTH SCIENCES CENTER · PI HALABI, ANASHEH · 2012 to 2014
$129k
NIA NIH HHS F30 AG042263NIA NIH HHS F30AG042263NINDS NIH HHS R01 NS046567NINDS NIH HHS R01NS046567
6 · The paper itself

Abstract

While DNA repair has been implicated in CAG·CTG repeat expansion, its role in the GAA·TTC expansion of Friedreich ataxia (FRDA) is less clear. We have developed a human cellular model that recapitulates the DNA repeat expansion found in FRDA patient tissues. In this model, GAA·TTC repeats expand incrementally and continuously. We have previously shown that the expansion rate is linked to transcription within the repeats. Our working hypothesis is that structures formed within the GAA·TTC repeat during transcription attract DNA repair enzymes that then facilitate the expansion process. MutSβ, a heterodimer of MSH2 and MSH3, is known to have a role in CAG·CTG repeat expansion. We now show that shRNA knockdown of either MSH2 or MSH3 slowed GAA·TTC expansion in our system. We further characterized the role of MutSβ in GAA·TTC expansion using a functional assay in primary FRDA patient-derived fibroblasts. These fibroblasts have no known propensity for instability in their native state. Ectopic expression of MSH2 and MSH3 induced GAA·TTC repeat expansion in the native FXN gene. MSH2 is central to mismatch repair and its absence or reduction causes a predisposition to cancer. Thus, despite its essential role in GAA·TTC expansion, MSH2 is not an attractive therapeutic target. The absence or reduction of MSH3 is not strongly associated with cancer predisposition. Accordingly, MSH3 has been suggested as a therapeutic target for CAG·CTG repeat expansion disorders. Our results suggest that MSH3 may also serve as a therapeutic target to slow the expansion of GAA·TTC repeats in the future.

Indexed as

DNA Mismatch RepairTrinucleotide Repeat ExpansionDNA-Binding ProteinsFibroblastsFriedreich AtaxiaGenetic Predisposition to DiseaseHEK293 CellsHumansModels, BiologicalMultienzyme ComplexesMutS DNA Mismatch-Binding ProteinMutS Homolog 2 ProteinMutS Homolog 3 ProteinNeoplasmsDNA-Binding ProteinsMSH2 protein, humanMSH3 protein, humanMultienzyme ComplexesMutS DNA Mismatch-Binding ProteinMutS Homolog 2 ProteinMutS Homolog 3 Protein

Identifiers

PMID22787155
PMCPMC3436174
OpenAlexW1982276380

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.