Evidence map›Paper›PMID 22787034›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2012

The mechanosensory structure of the hair cell requires clarin-1, a protein encoded by Usher syndrome III causative gene.

Ruishuang Geng, Sami Melki, Daniel H-C Chen, Guilian Tian, David N Furness, Tomoko Oshima-Takago, Jakob Neef, Tobias Moser, Charles Askew, Geoff Horwitz and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Clarin-2 gene supplementation durably preserves hearing in a model of progressive hearing loss.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Liquid-liquid phase separation in hair cell stereocilia development and maintenance.Computational and structural biotechnology journal · 2023
    Review
  15. Review
  16. Article
  17. Review
  18. Usher Syndrome.Audiology research · 2022
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 3 countries.

Ruishuang GengOtolaryngology Head and Neck Surgery, University Hospitals Case Medical Center, Case Western Reserve University, Cleveland, Ohio 44106, USA.
Sami Melki
Daniel H-C Chen
Guilian Tian
David N Furness
Tomoko Oshima-Takago
Jakob Neef
Tobias Moser
Charles Askew
Geoff Horwitz
Jeffrey R Holt
Yoshikazu Imanishi
Kumar N Alagramam
Case Western Reserve University · USUniversity Hospitals Case Medical Center · USUniversity of Göttingen · DEUniversity of Virginia · USBoston Children's Hospital · USBrain (Germany) · DEKeele University · GB

Funding

Ion Channel Function in Auditory & Vestibular Hair CellsR01DC005439 · NIDCD · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HOLT, JEFFREY R · 2001 to 2019
$5.5M
Molecular Genetics of Usher Syndrome IIIAR01DC010816 · NIDCD · CASE WESTERN RESERVE UNIVERSITY · PI ALAGRAMAM, KUMAR N · 2011 to 2015
$1.7M
NIDCD NIH HHS R01 DC005439NIDCD NIH HHS R01 DC010816NIDCD NIH HHS R01-DC010816NIDCD NIH HHS R01-DC05439
6 · The paper itself

Abstract

Mutation in the clarin-1 gene (Clrn1) results in loss of hearing and vision in humans (Usher syndrome III), but the role of clarin-1 in the sensory hair cells is unknown. Clarin-1 is predicted to be a four transmembrane domain protein similar to members of the tetraspanin family. Mice carrying null mutation in the clarin-1 gene (Clrn1(-/-)) show loss of hair cell function and a possible defect in ribbon synapse. We investigated the role of clarin-1 using various in vitro and in vivo approaches. We show by immunohistochemistry and patch-clamp recordings of Ca(2+) currents and membrane capacitance from inner hair cells that clarin-1 is not essential for formation or function of ribbon synapse. However, reduced cochlear microphonic potentials, FM1-43 [N-(3-triethylammoniumpropyl)-4-(4-(dibutylamino)styryl) pyridinium dibromide] loading, and transduction currents pointed to diminished cochlear hair bundle function in Clrn1(-/-) mice. Electron microscopy of cochlear hair cells revealed loss of some tall stereocilia and gaps in the v-shaped bundle, although tip links and staircase arrangement of stereocilia were not primarily affected by Clrn1(-/-) mutation. Human clarin-1 protein expressed in transfected mouse cochlear hair cells localized to the bundle; however, the pathogenic variant p.N48K failed to localize to the bundle. The mouse model generated to study the in vivo consequence of p.N48K in clarin-1 (Clrn1(N48K)) supports our in vitro and Clrn1(-/-) mouse data and the conclusion that CLRN1 is an essential hair bundle protein. Furthermore, the ear phenotype in the Clrn1(N48K) mouse suggests that it is a valuable model for ear disease in CLRN1(N48K), the most prevalent Usher syndrome III mutation in North America.

Indexed as

Acoustic StimulationAge FactorsAlcohol OxidoreductasesAnimalsAnimals, NewbornAsparagineBariumBiophysical PhenomenaCadherinsCell Line, TransformedCochleaDisease Models, AnimalDNA-Binding ProteinsEvoked Potentials, Auditory, Brain StemGreen Fluorescent ProteinsHair Cells, AuditoryAlcohol OxidoreductasesAsparagineBariumCadherinsCdh2 protein, mouseCLRN1 protein, humanClrn1 protein, mouseC-terminal binding proteinDNA-Binding ProteinsFM1 43glutamate receptor ionotropic, AMPA 2Green Fluorescent ProteinsLysineMembrane ProteinsPyridinium CompoundsQuaternary Ammonium CompoundsReceptors, AMPA

Identifiers

PMID22787034
PMCPMC3422646
OpenAlexW2130358131

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.