Evidence map›Paper›PMID 22786887›Full record

ArticlePlant physiology2012

Rice mitogen-activated protein kinase interactome analysis using the yeast two-hybrid system.

Raksha Singh, Mi-Ok Lee, Jae-Eun Lee, Jihyun Choi, Ji Hun Park, Eun Hye Kim, Ran Hee Yoo, Jung-Il Cho, Jong-Seong Jeon, Randeep Rakwal and 3 more

Abstract read
In one paragraph

Article in Plant physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Article
  2. Article
  3. Ferroptosis in plant immunity.Plant communications · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. OsMAPK6 positively regulates rice cold tolerance at seedling stage via phosphorylating and stabilizing OsICE1 and OsIPA1.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Update on the Roles of Rice MAPK Cascades.International journal of molecular sciences · 2021
    Review
  13. Article
  14. Article
  15. Differential expression of MEKK subfamily genes inPlant signaling & behavior · 2020
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Raksha SinghDepartment of Molecular Biology, College of Life Sciences, Sejong University, Gunja-dong, Gwangjin-gu, Seoul 143-747, Republic of Korea.
Mi-Ok Lee
Jae-Eun Lee
Jihyun Choi
Ji Hun Park
Eun Hye Kim
Ran Hee Yoo
Jung-Il Cho
Jong-Seong Jeon
Randeep Rakwal
Ganesh Kumar Agrawal
Jae Sun Moon
Nam-Soo Jwa

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitogen-activated protein kinase (MAPK) cascades support the flow of extracellular signals to intracellular target molecules and ultimately drive a diverse array of physiological functions in cells, tissues, and organisms by interacting with other proteins. Yet, our knowledge of the global physical MAPK interactome in plants remains largely fragmented. Here, we utilized the yeast two-hybrid system and coimmunoprecipitation, pull-down, bimolecular fluorescence complementation, subcellular localization, and kinase assay experiments in the model crop rice (Oryza sativa) to systematically map what is to our knowledge the first plant MAPK-interacting proteins. We identified 80 nonredundant interacting protein pairs (74 nonredundant interactors) for rice MAPKs and elucidated the novel proteome-wide network of MAPK interactors. The established interactome contains four membrane-associated proteins, seven MAP2Ks (for MAPK kinase), four MAPKs, and 59 putative substrates, including 18 transcription factors. Several interactors were also validated by experimental approaches (in vivo and in vitro) and literature survey. Our results highlight the importance of OsMPK1, an ortholog of tobacco (Nicotiana benthamiana) salicyclic acid-induced protein kinase and Arabidopsis (Arabidopsis thaliana) AtMPK6, among the rice MAPKs, as it alone interacts with 41 unique proteins (51.2% of the mapped MAPK interaction network). Additionally, Gene Ontology classification of interacting proteins into 34 functional categories suggested MAPK participation in diverse physiological functions. Together, the results obtained essentially enhance our knowledge of the MAPK-interacting protein network and provide a valuable research resource for developing a nearly complete map of the rice MAPK interactome.

Indexed as

Two-Hybrid System TechniquesAgrobacterium tumefaciensBacterial ProteinsEnzyme ActivationEnzyme AssaysGene LibraryHigh-Throughput Screening AssaysImmunoprecipitationLuminescent ProteinsMembrane ProteinsMitogen-Activated Protein KinasesNicotianaOnionsOryzaPhosphorylationPlant ProteinsBacterial ProteinsLuminescent ProteinsMembrane ProteinsMitogen-Activated Protein KinasesPlant ProteinsProteomeRecombinant Fusion ProteinsTranscription Factorsyellow fluorescent protein, Bacteria

Identifiers

PMID22786887
PMCPMC3440221

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.