Evidence map›Paper›PMID 22782511›Full record

ArticleArchives of neurology2012

Autosomal dominant familial dyskinesia and facial myokymia: single exome sequencing identifies a mutation in adenylyl cyclase 5.

Ying-Zhang Chen, Mark M Matsushita, Peggy Robertson, Mark Rieder, Santhosh Girirajan, Francesca Antonacci, Hillary Lipe, Evan E Eichler, Deborah A Nickerson, Thomas D Bird and 1 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in Archives of neurology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
7.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 124 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Scoping Review on ADCY5-Related Movement Disorders.Movement disorders clinical practice · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Association ofInternational journal of molecular sciences · 2022
    Article
  12. Article
  13. Structure ofeLife · 2022
    Article
  14. Article
  15. ADCY5 Related Dyskinesia-A Rare Mutation.Movement disorders clinical practice · 2022
    Article
  16. Review
  17. Expression and functions of adenylyl cyclases in the CNS.Fluids and barriers of the CNS · 2022
    Review
  18. Members of the KCTD family are major regulators of cAMP signaling.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Ying-Zhang ChenDepartment of Medicine (Medical Genetics), University of Washington, Seattle, WA 98195, USA.
Mark M Matsushita
Peggy Robertson
Mark Rieder
Santhosh Girirajan
Francesca Antonacci
Hillary Lipe
Evan E Eichler
Deborah A Nickerson
Thomas D Bird
Wendy H Raskind
University of Washington Medical Center · US

Funding

Northwest Genomics CenterUC2HL102926 · NHLBI · UNIVERSITY OF WASHINGTON · PI GREEN, PHILIP P, NICKERSON, DEBORAH A · 2010 to 2010
$14.0M
Northwest Genomics CenterRC2HL102926 · NHLBI · UNIVERSITY OF WASHINGTON · PI GREEN, PHILIP P, NICKERSON, DEBORAH A · 2009 to 2009
$11.0M
Next Generation gene discovery in neurogeneticsR01NS069719 · NINDS · UNIVERSITY OF WASHINGTON · PI RASKIND, WENDY H · 2010 to 2019
$5.0M
Next Generation Mendelian GeneticsRC2HG005608 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, NICKERSON, DEBORAH A · 2009 to 2010
$3.9M
WHI Sequencing Project (WHISP)UC2HL102924 · NHLBI · OHIO STATE UNIVERSITY · PI CARLSON, CHRISTOPHER S, JACKSON, REBECCA D · 2010 to 2010
$2.4M
WHI Sequencing Project (WHISP)RC2HL102924 · NHLBI · OHIO STATE UNIVERSITY · PI CARLSON, CHRISTOPHER S, JACKSON, REBECCA D · 2009 to 2009
$2.1M
Howard Hughes Medical InstituteNHGRI NIH HHS RC2 HG005608NHGRI NIH HHS RC2HG005608NHLBI NIH HHS HL 1029230NHLBI NIH HHS HL 102924NHLBI NIH HHS HL 102926NHLBI NIH HHS RC2 HL102924NHLBI NIH HHS RC2 HL102926NHLBI NIH HHS UC2 HL102924NHLBI NIH HHS UC2 HL102926NINDS NIH HHS R01 NS069719NINDS NIH HHS R01NS069719
6 · The paper itself

Abstract

backgroundFamilial dyskinesia with facial myokymia (FDFM) is an autosomal dominant disorder that is exacerbated by anxiety. In a 5-generation family of German ancestry, we previously mapped FDFM to chromosome band 3p21-3q21. The 72.5-Mb linkage region was too large for traditional positional mutation identification.

objectiveTo identify the gene responsible for FDFM by exome resequencing of a single affected individual.

participantsWe performed whole exome sequencing in 1 affected individual and used a series of bioinformatic filters, including functional significance and presence in dbSNP or the 1000 Genomes Project, to reduce the number of candidate variants. Co-segregation analysis was performed in 15 additional individuals in 3 generations.

main outcome measuresUnique DNA variants in the linkage region that co-segregate with FDFM.

resultsThe exome contained 23 428 single-nucleotide variants, of which 9391 were missense, nonsense, or splice site alterations. The critical region contained 323 variants, 5 of which were not present in 1 of the sequence databases. Adenylyl cyclase 5 (ADCY5) was the only gene in which the variant (c.2176G>A) was co-transmitted perfectly with disease status and was not present in 3510 control white exomes. This residue is highly conserved, and the change is nonconservative and predicted to be damaging.

conclusionsADCY5 is highly expressed in striatum. Mice deficient in Adcy5 develop a movement disorder that is worsened by stress. We conclude that FDFM likely results from a missense mutation in ADCY5. This study demonstrates the power of a single exome sequence combined with linkage information to identify causative genes for rare autosomal dominant mendelian diseases.

Indexed as

Adenylyl CyclasesDNA Mutational AnalysisDystonic DisordersExomeFacial Nerve DiseasesFamily HealthFemaleGenetic LinkageGermanyHumansMaleMiddle AgedMutation, MissensePolymorphism, Single NucleotideAdenylyl Cyclasesadenylyl cyclase type V

Identifiers

PMID22782511
PMCPMC3508680
OpenAlexW2139282632

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.