Evidence map›Paper›PMID 22778903›Full record

ArticleToxins2012

Cytotoxicity and glycan-binding properties of an 18 kDa lectin isolated from the marine sponge Halichondria okadai.

Ryo Matsumoto, Yuki Fujii, Sarkar M A Kawsar, Robert A Kanaly, Hidetaro Yasumitsu, Yasuhiro Koide, Imtiaj Hasan, Chihiro Iwahara, Yukiko Ogawa, Chang Hun Im and 6 more

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Marine lectins and their medicinal applications.Applied microbiology and biotechnology · 2015
    Review
  12. Review
  13. Lectins of marine hydrobionts.Biochemistry. Biokhimiia · 2013
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 4 countries.

Ryo MatsumotoLaboratory of Glycobiology and Marine Biochemistry, Department of Genome System Science, Graduate School of NanoBio Sciences, Yokohama City University, 22-2 Seto, Kanazawa-ku, Yokohama 236-0027, Japan. akagiwashizuten@yahoo.co.jp
Yuki Fujii
Sarkar M A Kawsar
Robert A Kanaly
Hidetaro Yasumitsu
Yasuhiro Koide
Imtiaj Hasan
Chihiro Iwahara
Yukiko Ogawa
Chang Hun Im
Shigeki Sugawara
Masahiro Hosono
Kazuo Nitta
Jiharu Hamako
Taei Matsui
Yasuhiro Ozeki
Yokohama City University · JPTohoku Medical and Pharmaceutical University · JPNagasaki International University · JPFujita Health University · JPUniversity of Chittagong · BDUniversity of Medical Sciences and Technology · SD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A divalent cation-independent lectin-HOL-18, with cytotoxic activity against leukemia cells, was purified from a demosponge, Halichondria okadai. HOL-18 is a 72 kDa tetrameric lectin that consists of four non-covalently bonded 18 kDa subunits. Hemagglutination activity of the lectin was strongly inhibited by chitotriose (GlcNAcβ1-4GlcNAcβ1-4GlcNAc), fetuin and mucins from porcine stomach and bovine submaxillary gland. Lectin activity was stable at pH 4-12 and temperatures lower than 60 °C. Frontal affinity chromatography with 16 types of pyridylaminated oligosaccharides indicated that the lectin had an affinity for N-linked complex-type and sphingolipid-type oligosaccharides with N-acetylated hexosamines and neuramic acid at the non-reducing termini. The lectin killed Jurkat leukemia T cells and K562 erythroleukemia cells in a dose- and carbohydrate-dependent manner.

Indexed as

AnimalsCell SurvivalCytotoxinsHemagglutination TestsHumansJurkat CellsK562 CellsLectinsPolysaccharidesPoriferaCytotoxinsLectinsPolysaccharidescytotoxicityfrontal affinity chromatography technologyglycoproteinJapanese black sponge (Halichondria okadai)lectin

Identifiers

PMID22778903
PMCPMC3386633
OpenAlexW2100124137

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.