ReviewSensors (Basel, Switzerland)2012
Classifying the topology of AHL-driven quorum sensing circuits in proteobacterial genomes.
Review in Sensors (Basel, Switzerland), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
23 citing papers in PubMed, 36 citations in OpenAlex.
- Diversity and evolution of quorum-sensing systems inFrontiers in bioinformatics · 2026Article
- The atypical organization of theJournal of bacteriology · 2024Review
- A balancing act: investigations on the impact of altered signal sensitivity in bacterial quorum sensing.Journal of bacteriology · 2023Article
- Potential quorum-sensing inhibitor ofMicrobiology spectrum · 2023Article
- Biofilm Biology and Engineering ofFrontiers in bioengineering and biotechnology · 2021Review
- Detection of Diverse N-Acyl Homoserine Lactone Signalling Molecules Among Bacteria Associated with Rice Rhizosphere.Current microbiology · 2020Article
- Flexibility and Adaptability of Quorum Sensing in Nature.Trends in microbiology · 2020Review
- Effect of the luxI/R gene on AHL-signaling molecules and QS regulatory mechanism in Hafnia alvei H4.AMB Express · 2019Article
- Article
- TwoJournal of bacteriology · 2018Article
- An Update on the Sociomicrobiology of Quorum Sensing in Gram-Negative Biofilm Development.Pathogens (Basel, Switzerland) · 2017Review
- Differential signal sensitivities can contribute to the stability of multispecies bacterial communities.Biology direct · 2017Article
- In silico analyses of conservational, functional and phylogenetic distribution of the LuxI and LuxR homologs in Gram-positive bacteria.Scientific reports · 2017Article
- Large Diversity and Original Structures of Acyl-Homoserine Lactones in Strain MOLA 401, a MarineFrontiers in microbiology · 2017Article
- Transcriptome analysis revealed that a quorum sensing system regulates the transfer of the pAt megaplasmid in Agrobacterium tumefaciens.BMC genomics · 2016Article
- Census of solo LuxR genes in prokaryotic genomes.Frontiers in cellular and infection microbiology · 2015Article
- RsaM: a transcriptional regulator of Burkholderia spp. with novel fold.The FEBS journal · 2014Article
- ComQXPA quorum sensing systems may not be unique to Bacillus subtilis: a census in prokaryotic genomes.PloS one · 2014Article
- Functions and regulation of quorum-sensing in Agrobacterium tumefaciens.Frontiers in plant science · 2014Review
- The organization of the quorum sensing luxI/R family genes in Burkholderia.International journal of molecular sciences · 2013Article
Corrections and comments
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Authors and funding
7 authors at 4 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Virulence and adaptability of many Gram-negative bacterial species are associated with an N-acylhomoserine lactone (AHL) gene regulation mechanism called quorum sensing (QS). The arrangement of quorum sensing genes is variable throughout bacterial genomes, although there are unifying themes that are common among the various topological arrangements. A bioinformatics survey of 1,403 complete bacterial genomes revealed characteristic gene topologies in 152 genomes that could be classified into 16 topological groups. We developed a concise notation for the patterns and show that the sequences of LuxR regulators and LuxI autoinducer synthase proteins cluster according to the topological patterns. The annotated topologies are deposited online with links to sequences and genome annotations at http://bacteria.itk.ppke.hu/QStopologies/.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.