Evidence map›Paper›PMID 22773841›Full record

ArticleThe Journal of biological chemistry2012

Calmodulin-binding locations on the skeletal and cardiac ryanodine receptors.

Xiaojun Huang, Bradley Fruen, Dinah T Farrington, Terence Wagenknecht, Zheng Liu

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. CaThe Biochemical journal · 2019
    Article
  7. Review
  8. Review
  9. Article
  10. A guide to the 3D structure of the ryanodine receptor type 1 by cryoEM.Protein science : a publication of the Protein Society · 2017
    Review
  11. Review of RyR1 pathway and associated pathomechanisms.Acta neuropathologica communications · 2016
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Allosteric mechanism of water-channel gating by Ca2+-calmodulin.Nature structural & molecular biology · 2013
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xiaojun HuangWadsworth Center, New York State Department of Health, Albany, NY 12201, USA.
Bradley Fruen
Dinah T Farrington
Terence Wagenknecht
Zheng Liu

Funding

Pathophysiological Regulation of Cardiac Myocyte RyR ChannelR01HL092097 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Donald M Bers, Robyn T Rebbeck · 2010 to 2026
$9.3M
STRUCTURE OF CHANNELS IN EXCITATION/CONTRACTION COUPLINGR01AR040615 · NIAMS · WADSWORTH CENTER · PI WAGENKNECHT, TERENCE C · 1991 to 2014
$5.6M
Structural Basis of Dysfunctional Calcium Release Channels in Heart DiseaseR01HL095541 · NHLBI · WADSWORTH CENTER · PI LIU, ZHENG · 2010 to 2013
$1.5M
Molecular interactions regulating RyR Ca2+ channelsR01HL076433 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI FRUEN, BRADLEY R. · 2005 to 2008
$1.4M
NHLBI NIH HHS R01 HL076433NHLBI NIH HHS R01 HL092097NHLBI NIH HHS R01 HL095541NIAMS NIH HHS R01 AR040615
6 · The paper itself

Abstract

Ryanodine receptor types 1 (RyR1) and 2 (RyR2) are calcium release channels that are highly enriched in skeletal and cardiac muscle, respectively, where they play an essential role in excitation-contraction coupling. Apocalmodulin (apo-CaM) weakly activates RyR1 but inhibits RyR2, whereas Ca(2+)-calmodulin inhibits both isoforms. Previous cryo-EM studies showed distinctly different binding locations on RyR1 for the two states of CaM. However, recent studies employing FRET appear to challenge these findings. Here, using cryo-EM, we have determined that a CaM mutant that is incapable of binding calcium binds to RyR1 at the apo site, regardless of the calcium concentration. We have also re-determined the location of RyR1-bound Ca(2+)-CaM using uniform experimental conditions. Our results show the existence of the two overlapping but distinct binding sites for CaM in RyR1 and imply that the binding location switch is due to Ca(2+) binding to CaM, as opposed to direct effects of Ca(2+) on RyR1. We also discuss explanations that could resolve the apparent conflict between the cryo-EM and FRET results. Interestingly, apo-CaM binds to RyR2 at a similar binding location to that of Ca(2+)-CaM on RyR1, in seeming agreement with the inhibitory effects of these two forms of CaM on their respective receptors.

Indexed as

AnimalsCalciumCalmodulinCryoelectron MicroscopyHEK293 CellsHumansMiceMuscle ProteinsMuscle, SkeletalMutationMyocardiumProtein BindingRyanodine Receptor Calcium Release ChannelCalciumCalmodulinMuscle ProteinsRyanodine Receptor Calcium Release Channel

Identifiers

PMID22773841
PMCPMC3436284

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.