ArticleApplied and environmental microbiology2012
Draft genome sequence of a psychrotolerant sulfur-oxidizing bacterium, Sulfuricella denitrificans skB26, and proteomic insights into cold adaptation.
Article in Applied and environmental microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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Who cites it
10 citing papers in PubMed.
- Genomic analysis of3 Biotech · 2025Article
- Genomes of Neutrophilic Sulfur-Oxidizing Chemolithoautotrophs Representing 9 Proteobacterial Species From 8 Genera.Frontiers in microbiology · 2019Article
- Draft Genome Sequence ofGenome announcements · 2018Article
- COEnvironmental microbiology · 2017Article
- Draft Genome Sequence of Clinical Strain TANI1 ofGenome announcements · 2017Article
- Impact of operating condition on the denitrifying bacterial community structure in a 3DBER-SAD reactor.Journal of industrial microbiology & biotechnology · 2017Article
- Draft Genome Sequence of Desulfatitalea tepidiphila S28bFT.Genome announcements · 2015Article
- Ecophysiology of Thioploca ingrica as revealed by the complete genome sequence supplemented with proteomic evidence.The ISME journal · 2015Article
- RNA helicases: diverse roles in prokaryotic response to abiotic stress.RNA biology · 2013Review
- Psychrophilic enzymes: from folding to function and biotechnology.Scientifica · 2013Review
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3 authors.
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Abstract
Except for several conspicuous cases, very little is known about sulfur oxidizers living in natural freshwater environments. Sulfuricella denitrificans skB26 is a psychrotolerant sulfur oxidizer recently isolated from a freshwater lake as a representative of a new genus in the class Betaproteobacteria. In this study, an approximately 3.2-Mb draft genome sequence of strain skB26 was obtained. In the draft genome, consisting of 23 contigs, a single rRNA operon, 43 tRNA genes, and 3,133 coding sequences were identified. The identified genes include those required for sulfur oxidation, denitrification, and carbon fixation. Comparative proteomic analysis was conducted to assess cold adaptation mechanisms of this organism. From cells grown at 22°C and 5°C, proteins were extracted for analysis by nano-liquid chromatography-electrospray ionization-tandem mass spectrometry. In the cells cultured at 5°C, relative abundances of ribosomal proteins, cold shock proteins, and DEAD/DEAH box RNA helicases were increased in comparison to those at 22°C. These results suggest that maintenance of proper translation is critical for growth under low-temperature conditions, similar to the case for other cold-adapted prokaryotes.
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