Evidence map›Paper›PMID 22773103›Full record

ArticleNature structural & molecular biology2012

LEDGF (p75) promotes DNA-end resection and homologous recombination.

Mads Daugaard, Annika Baude, Kasper Fugger, Lou Klitgaard Povlsen, Halfdan Beck, Claus Storgaard Sørensen, Nikolaj H T Petersen, Poul H B Sorensen, Claudia Lukas, Jiri Bartek and 3 more

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Article in Nature structural & molecular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 202 citations in OpenAlex.

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63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Mads DaugaardCell Death and Metabolism, Danish Cancer Society Research Center, Copenhagen, Denmark.
Annika Baude
Kasper Fugger
Lou Klitgaard Povlsen
Halfdan Beck
Claus Storgaard Sørensen
Nikolaj H T Petersen
Poul H B Sorensen
Claudia Lukas
Jiri Bartek
Jiri Lukas
Mikkel Rohde
Marja Jäättelä
Danish Cancer Society · DKInstitute of Molecular and Translational Medicine · CZUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lens epithelium-derived growth factor p75 splice variant (LEDGF) is a chromatin-binding protein known for its antiapoptotic activity and ability to direct human immunodeficiency virus into active transcription units. Here we show that LEDGF promotes the repair of DNA double-strand breaks (DSBs) by the homologous recombination repair pathway. Depletion of LEDGF impairs the recruitment of C-terminal binding protein interacting protein (CtIP) to DNA DSBs and the subsequent CtIP-dependent DNA-end resection. LEDGF is constitutively associated with chromatin through its Pro-Trp-Trp-Pro (PWWP) domain that binds preferentially to epigenetic methyl-lysine histone markers characteristic of active transcription units. LEDGF binds CtIP in a DNA damage-dependent manner, thereby enhancing its tethering to the active chromatin and facilitating its access to DNA DSBs. These data highlight the role of PWWP-domain proteins in DNA repair and provide a molecular explanation for the antiapoptotic and cancer cell survival-activities of LEDGF.

Indexed as

Adaptor Proteins, Signal TransducingApoptosisCarrier ProteinsCell Line, TumorCell SurvivalChromatinDNA Breaks, Double-StrandedEndodeoxyribonucleasesHeLa CellsHIVHumansNuclear ProteinsRecombinational DNA RepairRNA InterferenceRNA, Small InterferingTranscription FactorsAdaptor Proteins, Signal TransducingCarrier ProteinsChromatinEndodeoxyribonucleasesNuclear ProteinsPSIP1 protein, humanRBBP8 protein, humanRNA, Small InterferingTranscription Factors

Identifiers

PMID22773103
OpenAlexW1992915932

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.