Evidence map›Paper›PMID 22771891›Full record

ArticleBiochimica et biophysica acta2012

4-Hydroxy-2-oxoglutarate aldolase inactivity in primary hyperoxaluria type 3 and glyoxylate reductase inhibition.

Travis J Riedel, John Knight, Michael S Murray, Dawn S Milliner, Ross P Holmes, W Todd Lowther

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 70 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Metallomic Approach to Mercury and Selenium in the Liver Tissue ofInternational journal of molecular sciences · 2024
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Novel therapeutic approaches for the primary hyperoxalurias.Pediatric nephrology (Berlin, Germany) · 2021
    Review
  19. Future treatments for hyperoxaluria.Current opinion in urology · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Travis J RiedelDepartment of Biochemistry, Wake Forest School of Medicine, Winston-Salem, NC, USA.
John Knight
Michael S Murray
Dawn S Milliner
Ross P Holmes
W Todd Lowther
Wake Forest University · USMayo Clinic in Arizona · US

Funding

Primary HyperoxaluriaU54DK083908 · NIDDK · MAYO CLINIC ROCHESTER · PI MILLINER, DAWN SCHMAUTZ · 2009 to 2018
$12.3M
Mitochondrial Metabolism in Primary HyperoxaluriaR01DK054468 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HOLMES, ROSS P · 1999 to 2017
$4.1M
Endogenous Oxalate SynthesisR01DK073732 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HOLMES, ROSS P · 2006 to 2014
$2.4M
Hydroxproline Catabolism and HyperoxaluriaR01DK083527 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI HOLMES, ROSS P, LOWTHER, W TODD · 2010 to 2012
$753k
NIDDK NIH HHS DK054468NIDDK NIH HHS DK073732NIDDK NIH HHS DK083527NIDDK NIH HHS DK83908NIDDK NIH HHS R01 DK054468NIDDK NIH HHS R01 DK073732NIDDK NIH HHS R01 DK083527NIDDK NIH HHS U54 DK083908
6 · The paper itself

Abstract

Mutations in the gene encoding for 4-hydroxy-2-oxoglutarate aldolase (HOGA) are associated with an excessive production of oxalate in Primary Hyperoxaluria type 3 (PH3). This enzyme is the final step of the hydroxyproline degradation pathway within the mitochondria and catalyzes the cleavage of 4-hydroxy-2-oxoglutarate (HOG) to pyruvate and glyoxylate. No analyses have been performed to assess the consequences of the mutations identified, particularly for those variants that produce either full-length or nearly full-length proteins. In this study, the expression, stability, and activity of nine PH3 human HOGA variants were examined. Using recombinant protein produced in Escherichia coli as well as transfected Chinese hamster ovary (CHO) cells, it was found that all nine PH3 variants are quite unstable, have a tendency to aggregate, and retain no measurable activity. A buildup of HOG was confirmed in the urine, sera and liver samples from PH3 patients. To determine how HOG is cleaved in the absence of HOGA activity, the ability of N-acetylneuraminate aldolase (NAL) to cleave HOG was evaluated. NAL showed minimal activity towards HOG. Whether the expected buildup of HOG in mitochondria could inhibit glyoxylate reductase (GR), the enzyme mutated in PH2, was also evaluated. GR was inhibited by HOG but not by 2-hydroxyglutarate or 2-oxoglutarate. Thus, one hypothetical component of the molecular basis for the excessive oxalate production in PH3 appears to be the inhibition of GR by HOG, resulting in a phenotype similar to PH2.

Indexed as

Alcohol OxidoreductasesAnimalsCells, CulturedCHO CellsCricetinaeGlutaratesHumansHydroxyprolineHyperoxaluria, PrimaryKetoglutaric AcidsLiverMitochondriaMutationOxalatesOxo-Acid-LyasesRecombinant Proteins4-hydroxy-2-oxoglutarate aldolaseAlcohol Oxidoreductasesalpha-hydroxyglutarateGlutaratesglyoxylate reductaseHydroxyprolineKetoglutaric AcidsN-acetylneuraminate lyaseOxalatesOxo-Acid-LyasesRecombinant Proteins

Identifiers

PMID22771891
PMCPMC3418427
OpenAlexW2088094515

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.