Evidence map›Paper›PMID 22770215›Full record

ArticleCell2012

A translation-like cycle is a quality control checkpoint for maturing 40S ribosome subunits.

Bethany S Strunk, Megan N Novak, Crystal L Young, Katrin Karbstein

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 183 papers.

0numbers the graph read from it
0cells of the map it votes in
183citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

183 citing papers in PubMed, 257 citations in OpenAlex.

  1. Review
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  11. Ribosome Assembly and Repair.Annual review of cell and developmental biology · 2024
    Review
  12. Article
  13. Review
  14. Article
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  19. Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Review

123 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Bethany S StrunkDepartment of Cancer Biology, The Scripps Research Institute, Jupiter, FL 33458, USA.
Megan N Novak
Crystal L Young
Katrin Karbstein
Scripps Research Institute · USFurman University · USUniversity of Michigan–Ann Arbor · US

Funding

Quality Control in Ribosome Assembly - the Function of Regulatory ProteinsR01GM086451 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARBSTEIN, KATRIN · 2009 to 2019
$4.8M
NIGMS NIH HHS R01 GM086451NIGMS NIH HHS R01-GM086451
6 · The paper itself

Abstract

Assembly factors (AFs) prevent premature translation initiation on small (40S) ribosomal subunit assembly intermediates by blocking ligand binding. However, it is unclear how AFs are displaced from maturing 40S ribosomes, if or how maturing subunits are assessed for fidelity, and what prevents premature translation initiation once AFs dissociate. Here we show that maturation involves a translation-like cycle whereby the translation factor eIF5B, a GTPase, promotes joining of large (60S) subunits with pre-40S subunits to give 80S-like complexes, which are subsequently disassembled by the termination factor Rli1, an ATPase. The AFs Tsr1 and Rio2 block the mRNA channel and initiator tRNA binding site, and therefore 80S-like ribosomes lack mRNA or initiator tRNA. After Tsr1 and Rio2 dissociate from 80S-like complexes Rli1-directed displacement of 60S subunits allows for translation initiation. This cycle thus provides a functional test of 60S subunit binding and the GTPase site before ribosomes enter the translating pool.

Indexed as

Protein BiosynthesisAdenylate KinaseATP-Binding Cassette TransportersBinding SitesCell Cycle ProteinsEndoribonucleasesEukaryotic Initiation FactorsGTP PhosphohydrolasesNuclear ProteinsNucleoside-TriphosphataseRibosome Subunits, Large, EukaryoticRibosome Subunits, Small, EukaryoticSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAdenylate KinaseATP-Binding Cassette TransportersCell Cycle ProteinsDom34 protein, S cerevisiaeEndoribonucleaseseukaryotic initiation factor-5BEukaryotic Initiation FactorsFAP7 protein, S cerevisiaeGTP PhosphohydrolasesNuclear ProteinsNucleoside-TriphosphataseRLI1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID22770215
PMCPMC3615461
OpenAlexW2050656609

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.