Evidence map›Paper›PMID 22768983›Full record

ArticleGenomics, proteomics & bioinformatics2012

Transcriptome comparison of susceptible and resistant wheat in response to powdery mildew infection.

Mingming Xin, Xiangfeng Wang, Huiru Peng, Yingyin Yao, Chaojie Xie, Yao Han, Zhongfu Ni, Qixin Sun

Open access · goldAbstract readComparative Study
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 104 citations in OpenAlex.

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  13. Understanding Rice-Genes · 2021
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  17. A spontaneous wheat-Aegilops longissima translocation carrying Pm66 confers resistance to powdery mildew.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Mingming XinState Key Laboratory for Agrobiotechnology and MOE Key Laboratory of Crop Heterosis and Utilization and MOA Key Laboratory of Crop Genomics and Genetic Improvement, Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing 100193, China.
Xiangfeng Wang
Huiru Peng
Yingyin Yao
Chaojie Xie
Yao Han
Zhongfu Ni
Qixin Sun
State Key Laboratory of Plant Genomics · CNChina Agricultural University · CNUniversity of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Powdery mildew (Pm) caused by the infection of Blumeria graminis f. sp. tritici (Bgt) is a worldwide crop disease resulting in significant loss of wheat yield. To profile the genes and pathways responding to the Bgt infection, here, using Affymetrix wheat microarrays, we compared the leaf transcriptomes before and after Bgt inoculation in two wheat genotypes, a Pm-susceptible cultivar Jingdong 8 (S) and its near-isogenic line (R) carrying a single Pm resistant gene Pm30. Our analysis showed that the original gene expression status in the S and R genotypes of wheat was almost identical before Bgt inoculation, since only 60 genes exhibited differential expression by P = 0.01 cutoff. However, 12 h after Bgt inoculation, 3014 and 2800 genes in the S and R genotype, respectively, responded to infection. A wide range of pathways were involved, including cell wall fortification, flavonoid biosynthesis and metabolic processes. Furthermore, for the first time, we show that sense-antisense pair genes might be participants in wheat-powdery mildew interaction. In addition, the results of qRT-PCR analysis on several candidate genes were consistent with the microarray data in their expression patterns. In summary, this study reveals leaf transcriptome changes before and after powdery mildew infection in wheat near-isogenic lines, suggesting that powdery mildew resistance is a highly complex systematic response involving a large amount of gene regulation.

Indexed as

TranscriptomeAscomycotaGenes, PlantPlant DiseasesTriticum

Identifiers

PMID22768983
PMCPMC5054165
OpenAlexW2074252549

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.