Evidence map›Paper›PMID 22768338›Full record

ArticlePloS one2012

A pro-cathepsin L mutant is a luminal substrate for endoplasmic-reticulum-associated degradation in C. elegans.

Mark T Miedel, Nathan J Graf, Kate E Stephen, Olivia S Long, Stephen C Pak, David H Perlmutter, Gary A Silverman, Cliff J Luke

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Vitamin BNature communications · 2026
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  19. d-Serine and d-Alanine Regulate Adaptive Foraging Behavior inThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mark T MiedelDepartment of Pediatrics, Cell Biology and Physiology, University of Pittsburgh School of Medicine, Children's Hospital of Pittsburgh of UPMC, Pittsburgh, Pennsylvania, USA.
Nathan J Graf
Kate E Stephen
Olivia S Long
Stephen C Pak
David H Perlmutter
Gary A Silverman
Cliff J Luke

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
High Throughput Genetic and Drug Screens for Alph-1-Antitrypsin DeficiencyR01DK079806 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SILVERMAN, GARY ARTHUR · 2008 to 2011
$2.4M
Hepatocellular Carcinoma in Antitrypsin DeficiencyR01DK076918 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PERLMUTTER, DAVID H · 2008 to 2012
$2.1M
Intracellular Serpin Regulation of Intestinal Cell NecrosisR01DK081422 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SILVERMAN, GARY ARTHUR · 2009 to 2012
$1.6M
The Role of Intracellular Serpins in the Regulation of NecrosisF32DK086112 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MIEDEL, MARK T. · 2010 to 2012
$153k
NCATS NIH HHS UL1 TR000005NIDDK NIH HHS DK076918NIDDK NIH HHS DK079806NIDDK NIH HHS DK081422NIDDK NIH HHS DK0854512NIDDK NIH HHS F32 DK086112NIDDK NIH HHS F32DK086112NIDDK NIH HHS R01 DK076918NIDDK NIH HHS R01 DK079806NIDDK NIH HHS R01 DK081422
6 · The paper itself

Abstract

Endoplasmic-reticulum associated degradation (ERAD) is a major cellular misfolded protein disposal pathway that is well conserved from yeast to mammals. In yeast, a mutant of carboxypeptidase Y (CPY*) was found to be a luminal ER substrate and has served as a useful marker to help identify modifiers of the ERAD pathway. Due to its ease of genetic manipulation and the ability to conduct a genome wide screen for modifiers of molecular pathways, C. elegans has become one of the preferred metazoans for studying cell biological processes, such as ERAD. However, a marker of ERAD activity comparable to CPY* has not been developed for this model system. We describe a mutant of pro-cathepsin L fused to YFP that no longer targets to the lysosome, but is efficiently eliminated by the ERAD pathway. Using this mutant pro-cathepsin L, we found that components of the mammalian ERAD system that participate in the degradation of ER luminal substrates were conserved in C. elegans. This transgenic line will facilitate high-throughput genetic or pharmacological screens for ERAD modifiers using widefield epifluorescence microscopy.

Indexed as

Mutation, MissenseProtein FoldingAmino Acid SubstitutionAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsCathepsin ACathepsin LCell LineEndoplasmic ReticulumEndoplasmic Reticulum-Associated DegradationCaenorhabditis elegans ProteinsCathepsin ACathepsin LCPL-1 protein, C elegans

Identifiers

PMID22768338
PMCPMC3388072

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.