ArticlePloS one2012
Coalescent simulations reveal hybridization and incomplete lineage sorting in Mediterranean Linaria.
Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed.
- Historical introgression as a driver of diversification of diploid Picris (Compositae) in the Mediterranean Basin.The Plant journal : for cell and molecular biology · 2025Article
- Climatic and edaphic niche shifts during plant radiation in the Mediterranean biodiversity hotspot.Annals of botany · 2025Article
- Pleistocene climate oscillations have shaped the expansion and contraction speciation model of the globose Eriosyce sect. Neoporteria cacti in Central Chile.Annals of botany · 2024Article
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- Phylogeny ofEcology and evolution · 2023Article
- Deep Genotypic Species Delimitation ofJournal of fungi (Basel, Switzerland) · 2022Article
- Alternative Modes of Introgression-Mediated Selection Shaped Crop Adaptation to Novel Climates.Genome biology and evolution · 2022Article
- Allele Sorting as a Novel Approach to Resolving the Origin of Allotetraploids Using Hyb-Seq Data: A Case Study of the Balkan Mountain EndemicFrontiers in plant science · 2021Article
- The low-copy nuclear gene Agt1 as a novel DNA barcoding marker for Bromeliaceae.BMC plant biology · 2020Article
- Genomics of Evolutionary Novelty in Hybrids and Polyploids.Frontiers in genetics · 2020Review
- Evaluating methodologies for species delimitation: the mismatch between phenotypes and genotypes in lichenized fungi (Persoonia · 2019Article
- Maximize Resolution or Minimize Error? Using Genotyping-By-Sequencing to Investigate the Recent Diversification ofFrontiers in plant science · 2019Article
- Considerations and consequences of allowing DNA sequence data as types of fungal taxa.IMA fungus · 2018Article
- Genetic and Historical Colonization Analyses of an Endemic Savanna Tree,Frontiers in plant science · 2018Article
- Article
- Genomic history of the origin and domestication of common bean unveils its closest sister species.Genome biology · 2017Article
- Peripatric speciation in an endemic Macaronesian plant after recent divergence from a widespread relative.PloS one · 2017Article
- Horizontal gene transfer from Agrobacterium to plants.Frontiers in plant science · 2014Review
- The evolutionary fate of the horizontally transferred agrobacterial mikimopine synthase gene in the genera Nicotiana and Linaria.PloS one · 2014Article
- Corolla morphology influences diversification rates in bifid toadflaxes (Linaria sect. Versicolores).Annals of botany · 2013Article
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3 authors.
Funding
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Abstract
We examined the phylogenetic history of Linaria with special emphasis on the Mediterranean sect. Supinae (44 species). We revealed extensive highly supported incongruence among two nuclear (ITS, AGT1) and two plastid regions (rpl32-trnL(UAG), trnS-trnG). Coalescent simulations, a hybrid detection test and species tree inference in *BEAST revealed that incomplete lineage sorting and hybridization may both be responsible for the incongruent pattern observed. Additionally, we present a multilabelled *BEAST species tree as an alternative approach that allows the possibility of observing multiple placements in the species tree for the same taxa. That permitted the incorporation of processes such as hybridization within the tree while not violating the assumptions of the *BEAST model. This methodology is presented as a functional tool to disclose the evolutionary history of species complexes that have experienced both hybridization and incomplete lineage sorting. The drastic climatic events that have occurred in the Mediterranean since the late Miocene, including the Quaternary-type climatic oscillations, may have made both processes highly recurrent in the Mediterranean flora.
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