Evidence map›Paper›PMID 22763788›Full record

ReviewThe Journal of investigative dermatology2012

Epigenetic regulation of gene expression in keratinocytes.

Vladimir A Botchkarev, Michal R Gdula, Andrei N Mardaryev, Andrei A Sharov, Michael Y Fessing

Abstract readReview
In one paragraph

Review in The Journal of investigative dermatology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 125 citations in OpenAlex.

  1. Review
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  14. Article
  15. Article
  16. DNA methylation patterns in CD4Frontiers in immunology · 2023
    Article
  17. Article
  18. P16INK4A-More Than a Senescence Marker.Life (Basel, Switzerland) · 2022
    Review
  19. Review
  20. Epigenetic Mechanisms of Epidermal Differentiation.International journal of molecular sciences · 2022
    Review

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Vladimir A BotchkarevCentre for Skin Sciences, University of Bradford, Bradford, UK. v.a.botchkarev@bradford.ac.uk
Michal R Gdula
Andrei N Mardaryev
Andrei A Sharov
Michael Y Fessing
University of Bradford · GBBoston University · US

Funding

FUNCTIONS OF NOGGIN AND SMAD1/5 IN HAIR GROWTH CONTROLR01AR049778 · NIAMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BOTCHKAREV, VLADIMIR A · 2004 to 2014
$3.5M
Molecular control of normal and neoplastic skin stem cellsK01AR056771 · NIAMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SHAROV, ANDREY · 2009 to 2013
$621k
Higher-order chromatin remodeling and regulation of pigmentationR21AR063851 · NIAMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SHAROV, ANDREY · 2013 to 2014
$383k
Medical Research Council G0901666NIAMS NIH HHS K01 AR056771NIAMS NIH HHS R01 AR049778NIAMS NIH HHS R21 AR063851
6 · The paper itself

Abstract

The nucleus is a complex and highly compartmentalized organelle, which undergoes major organization changes during cell differentiation, allowing cells to become specialized and fulfill their functions. During terminal differentiation of the epidermal keratinocytes, the nucleus undergoes a programmed transformation from active status, associated with execution of the genetic programs of cornification and epidermal barrier formation, to a fully inactive condition and becomes a part of the keratinized cells of the cornified layer. Tremendous progress achieved within the past two decades in understanding the biology of the nucleus and epigenetic mechanisms controlling gene expression allowed defining several levels in the regulation of cell differentiation-associated gene expression programs, including an accessibility of the gene regulatory regions to DNA-protein interactions, covalent DNA and histone modifications, and ATP-dependent chromatin remodeling, as well as higher-order chromatin remodeling and nuclear compartmentalization of the genes and transcription machinery. Here, we integrate our current knowledge of the mechanisms controlling gene expression during terminal keratinocyte differentiation with distinct levels of chromatin organization and remodeling. We also propose directions to further explore the role of epigenetic mechanisms and their interactions with other regulatory systems in the control of keratinocyte differentiation in normal and diseased skin.

Indexed as

AnimalsCell DifferentiationCell NucleusEpigenesis, GeneticGene Expression RegulationHumansKeratinocytes

Identifiers

PMID22763788
PMCPMC3650472
OpenAlexW2033599074

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.