Evidence map›Paper›PMID 22761594›Full record

ArticlePLoS genetics2012

A broad requirement for TLS polymerases η and κ, and interacting sumoylation and nuclear pore proteins, in lesion bypass during C. elegans embryogenesis.

Sophie F Roerink, Wouter Koole, L Carine Stapel, Ron J Romeijn, Marcel Tijsterman

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 52 citations in OpenAlex.

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  14. The Base Excision Repair Pathway in the NematodeFrontiers in cell and developmental biology · 2020
    Review
  15. Genetic and cellular sensitivity ofDisease models & mechanisms · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sophie F RoerinkDepartment of Toxicogenetics, Leiden University Medical Center, Leiden, The Netherlands.
Wouter Koole
L Carine Stapel
Ron J Romeijn
Marcel Tijsterman
Leiden University Medical Center · NL

Funding

European Research Council 203379
6 · The paper itself

Abstract

Translesion synthesis (TLS) polymerases are specialized DNA polymerases capable of inserting nucleotides opposite DNA lesions that escape removal by dedicated DNA repair pathways. TLS polymerases allow cells to complete DNA replication in the presence of damage, thereby preventing checkpoint activation, genome instability, and cell death. Here, we characterize functional knockouts for polh-1 and polk-1, encoding the Caenorhabditis elegans homologs of the Y-family TLS polymerases η and κ. POLH-1 acts at many different DNA lesions as it protects cells against a wide range of DNA damaging agents, including UV, γ-irradiation, cisplatin, and methyl methane sulphonate (MMS). POLK-1 acts specifically but redundantly with POLH-1 in protection against methylation damage. Importantly, both polymerases play a prominent role early in embryonic development to allow fast replication of damaged genomes. Contrary to observations in mammalian cells, we show that neither POLH-1 nor POLK-1 is required for homologous recombination (HR) repair of DNA double-strand breaks. A genome-wide RNAi screen for genes that protect the C. elegans genome against MMS-induced DNA damage identified novel components in DNA damage bypass in the early embryo. Our data suggest SUMO-mediated regulation of both POLH-1 and POLK-1, and point towards a previously unrecognized role of the nuclear pore in regulating TLS.

Indexed as

Caenorhabditis elegansDNA DamageDNA-Directed DNA PolymeraseAnimalsCaenorhabditis elegans ProteinsCisplatinDNA RepairEmbryonic DevelopmentGamma RaysGene Knockout TechniquesHomologous RecombinationMethyl MethanesulfonateNuclear PorePorinsRadiation-Protective AgentsSmall Ubiquitin-Related Modifier ProteinsCaenorhabditis elegans ProteinsCisplatinDNA-Directed DNA PolymeraseMethyl MethanesulfonatePOLH-1 protein, C elegansPOLK-1 protein, C elegansPorinsRadiation-Protective AgentsSmall Ubiquitin-Related Modifier ProteinsY-Family DNA Polymerases

Identifiers

PMID22761594
PMCPMC3386174
OpenAlexW1965768718

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.