Evidence map›Paper›PMID 22761277›Full record

ArticleThe Journal of endocrinology2012

Duplicated zebrafish co-orthologs of parathyroid hormone-related peptide (PTHrP, Pthlh) play different roles in craniofacial skeletogenesis.

Yi-Lin Yan, Poulomi Bhattacharya, Xin Jun He, Bhaskar Ponugoti, Ben Marquardt, Jason Layman, Melissa Grunloh, John H Postlethwait, David A Rubin

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of endocrinology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
  2. Structure and function of the larval teleost fish gill.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2024
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Type II NaPflugers Archiv : European journal of physiology · 2019
    Review
  8. Review
  9. Review
  10. Pth4, an ancient parathyroid hormone lost in eutherian mammals, reveals a new brain-to-bone signaling pathway.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2017
    Article
  11. Article
  12. PTH Reloaded: A New Evolutionary Perspective.Frontiers in physiology · 2017
    Review
  13. Article
  14. Article
  15. Article
  16. Zebrafish Craniofacial Development: A Window into Early Patterning.Current topics in developmental biology · 2015
    Review
  17. Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Yi-Lin YanInstitute of Neuroscience, University of Oregon, Eugene, Oregon 97403, USA.
Poulomi Bhattacharya
Xin Jun He
Bhaskar Ponugoti
Ben Marquardt
Jason Layman
Melissa Grunloh
John H Postlethwait
David A Rubin
University of Oregon · USBreast Cancer Care · GBIllinois State University · US

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
Resources for Teleost Gene Duplicates and Human DiseaseR01OD011116 · OD · UNIVERSITY OF OREGON · PI POSTLETHWAIT, JOHN H. · 2012 to 2020
$5.4M
RESOURCES FOR TELEOST GENE DUPLICATES AND HUMAN DISEASER01RR020833 · NCRR · UNIVERSITY OF OREGON · PI POSTLETHWAIT, JOHN H. · 2005 to 2011
$3.6M
GENOMIC ANALYSIS OF ZEBRAFISH DEVELOPMENTR01RR010715 · NCRR · UNIVERSITY OF OREGON · PI POSTLETHWAIT, JOHN HARVEY · 1995 to 2006
$3.1M
Regulation of the PTH/PTHrP type-2 receptor and TIP39R15DK060513 · NIDDK · ILLINOIS STATE UNIVERSITY · PI RUBIN, DAVID ALAN · 2002 to 2002
$125k
NCRR NIH HHS 3R01RR020833NCRR NIH HHS R01 RR010715NCRR NIH HHS R01 RR020833NCRR NIH HHS R01RR20833NCRR NIH HHS R0 RR10715NICHD NIH HHS HD05034NICHD NIH HHS P01 HD022486NICHD NIH HHS P01 HD22486NICHD NIH HHS P01HD22486NIDDK NIH HHS DK60513NIDDK NIH HHS R15 DK060513NIH HHS R01 OD011116
6 · The paper itself

Abstract

In mammals, parathyroid hormone-related peptide (PTHrP, alias PTH-like hormone (Pthlh)) acts as a paracrine hormone that regulates the patterning of cartilage, bone, teeth, pancreas, and thymus. Beyond mammals, however, little is known about the molecular genetic mechanisms by which Pthlh regulates early development. To evaluate conserved pathways of craniofacial skeletogenesis, we isolated two Pthlh co-orthologs from the zebrafish (Danio rerio) and investigated their structural, phylogenetic, and syntenic relationships, expression, and function. Results showed that pthlh duplicates originated in the teleost genome duplication. Zebrafish pthlha and pthlhb were maternally expressed and showed overlapping and distinct zygotic expression patterns during skeletal development that mirrored mammalian expression domains. To explore the regulation of duplicated pthlh genes, we studied their expression patterns in mutants and found that both sox9a and sox9b are upstream of pthlha in arch and fin bud cartilages, but only sox9b is upstream of pthlha in the pancreas. Morpholino antisense knockdown showed that pthlha regulates both sox9a and sox9b in the pharyngeal arches but not in the brain or otic vesicles and that pthlhb does not regulate either sox9 gene, which is likely related to its highly degraded nuclear localization signal. Knockdown of pthlha but not pthlhb caused runx2b overexpression in craniofacial cartilages and premature bone mineralization. We conclude that in normal cartilage development, sox9 upregulates pthlh, which downregulates runx2, and that the duplicated nature of all three of these genes in zebrafish creates a network of regulation by different co-orthologs in different tissues.

Indexed as

Amino Acid SequenceAnimalsAntisense Elements (Genetics)Branchial RegionCartilageDNA, ComplementaryFacial BonesGene DuplicationGene Expression Regulation, DevelopmentalMolecular Sequence DataOsteogenesisParathyroid Hormone-Related ProteinPhenotypePhylogenySkullSOX9 Transcription FactorAntisense Elements (Genetics)DNA, ComplementaryParathyroid Hormone-Related ProteinRunx2b protein, zebrafishSox9a protein, zebrafishSox9b protein, zebrafishSOX9 Transcription FactorTranscription FactorsZebrafish Proteins

Identifiers

PMID22761277
PMCPMC3718479
OpenAlexW2121152928

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.