Evidence map›Paper›PMID 22759921›Full record

ArticlePhysiological genomics2012

In silico QTL mapping of maternal nurturing ability with the mouse diversity panel.

D L Hadsell, J Wei, W Olea, L A Hadsell, A Renwick, P C Thomson, M Shariflou, P Williamson

Abstract read
In one paragraph

Article in Physiological genomics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. In silico mapping of quantitative trait loci (QTL) regulating the milk ionome in mice identifies a milk iron locus on chromosome 1.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  3. Article
  4. Review
  5. Genetic analysis of low survival rate of pups in RR/Sgn inbred mice.The Journal of veterinary medical science · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

D L HadsellUSDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030-2600, USA. dhadsell@bcm.edu
J Wei
W Olea
L A Hadsell
A Renwick
P C Thomson
M Shariflou
P Williamson

Funding

QTL and QTL Genes Underlying Lactation PerformanceR21HD059746 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI HADSELL, DARRYL L · 2009 to 2010
$374k
NICHD NIH HHS 1R21HD-059746-01A1NICHD NIH HHS R21 HD059746
6 · The paper itself

Abstract

Significant variation exists for maternal nurturing ability in inbred mice. Although classical mapping approaches have identified quantitative trait loci (QTL) that may account for this variation, the underlying genes are unknown. In this study, lactation performance data among the mouse diversity panel were used to map genomic regions associated with this variation. Females from each of 32 inbred strains (n = 8-19 dams/strain) were studied during the first 8 days of lactation by allowing them to raise weight- and size-normalized cross-foster litters (10 pups/litter). Average daily weight gain (ADG) of litters served as the primary indicator of milk production. The number of pups successfully reared to 8 days (PNUM8) also served as a related indicator of maternal performance. Initial haplotype association analysis using a Bonferroni-corrected, genome-wide threshold revealed 10 and 15 associations encompassing 11 and 13 genes for ADG and PNUM8, respectively. The most significant of these associated haplotype blocks were found on MMU 8, 11, and 19 and contained the genes Nr3c2, Egfr, Sec61g, and Gnaq. Lastly, two haplotype blocks on MMU9 were detected in association with PNUM8. These overlapped with the previously described maternal performance QTL, Neogq1. These results suggest that the application of in silico QTL mapping is a useful tool in discovering the presence of novel candidate genes involved in determining lactation capacity in mice.

Indexed as

Genetic VariationAnimalsAnimals, Inbred StrainsAnimals, NewbornComputational BiologyErbB ReceptorsFemaleGene Expression RegulationGenome-Wide Association StudyHaplotypesLactationLitter SizeMaleMammary Glands, AnimalMembrane ProteinsMiceErbB ReceptorsMembrane ProteinsReceptors, MineralocorticoidRNA, Messenger

Identifiers

PMID22759921
PMCPMC3774570

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.