Evidence map›Paper›PMID 22755682›Full record

ArticleMedical physics2012

3D ultrasound image segmentation using wavelet support vector machines.

Hamed Akbari, Baowei Fei

Abstract read
In one paragraph

Article in Medical physics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Deep dense multi-path neural network for prostate segmentation in magnetic resonance imaging.International journal of computer assisted radiology and surgery · 2018
    Article
  5. PSNet: prostate segmentation on MRI based on a convolutional neural network.Journal of medical imaging (Bellingham, Wash.) · 2018
    Article
  6. Article
  7. Article
  8. Automatic segmentation of the prostate on CT images using deep learning and multi-atlas fusion.Proceedings of SPIE--the International Society for Optical Engineering · 2017
    Article
  9. Molecular imaging and fusion targeted biopsy of the prostate.Clinical and translational imaging · 2017
    Article
  10. Deep Learning based Classification for Head and Neck Cancer Detection with Hyperspectral Imaging in an Animal Model.Proceedings of SPIE--the International Society for Optical Engineering · 2017
    Article
  11. Article
  12. Review
  13. Article
  14. Combining Population and Patient-Specific Characteristics for Prostate Segmentation on 3D CT Images.Proceedings of SPIE--the International Society for Optical Engineering · 2016
    Article
  15. Random Walk Based Segmentation for the Prostate on 3D Transrectal Ultrasound Images.Proceedings of SPIE--the International Society for Optical Engineering · 2016
    Article
  16. Article
  17. Article
  18. A Minimum Spanning Forest Based Hyperspectral Image Classification Method for Cancerous Tissue Detection.Proceedings of SPIE--the International Society for Optical Engineering · 2014
    Article
  19. Article
  20. Mapping Cardiac Fiber Orientations from High-Resolution DTI to High-Frequency 3D Ultrasound.Proceedings of SPIE--the International Society for Optical Engineering · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Hamed AkbariDepartment of Radiology and Imaging Sciences, Emory University School of Medicine, Atlanta, GA 30329, USA.
Baowei Fei

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025008 · NCRR · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2007 to 2011
$29.0M
Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
TARGETING DEATH RECEPTOR-MEDIATED APOPTOSIS FOR HEAD AND NECK CANCERP50CA128613 · NCI · EMORY UNIVERSITY · PI SHIN, DONG M · 2007 to 2011
$12.0M
uPAR Targeted in Vivo Molecular Magnetic Resonance Imaging of....P50CA128301 · NCI · EMORY UNIVERSITY · PI NYE, JONATHON A · 2008 to 2012
$6.8M
MOLECULAR IMAGING DIRECTED, 3D ULTRASOUND-GUIDED, BIOPSY SYSTEMR01CA156775 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2011 to 2016
$1.7M
NCATS NIH HHS UL1 TR000454NCI NIH HHS P50 CA128301NCI NIH HHS P50CA128301NCI NIH HHS P50 CA128613NCI NIH HHS P50CA128613NCI NIH HHS R01 CA156775NCI NIH HHS R01CA156775NCRR NIH HHS UL1 RR025008
6 · The paper itself

Abstract

purposeTransrectal ultrasound (TRUS) imaging is clinically used in prostate biopsy and therapy. Segmentation of the prostate on TRUS images has many applications. In this study, a three-dimensional (3D) segmentation method for TRUS images of the prostate is presented for 3D ultrasound-guided biopsy.

methodsThis segmentation method utilizes a statistical shape, texture information, and intensity profiles. A set of wavelet support vector machines (W-SVMs) is applied to the images at various subregions of the prostate. The W-SVMs are trained to adaptively capture the features of the ultrasound images in order to differentiate the prostate and nonprostate tissue. This method consists of a set of wavelet transforms for extraction of prostate texture features and a kernel-based support vector machine to classify the textures. The voxels around the surface of the prostate are labeled in sagittal, coronal, and transverse planes. The weight functions are defined for each labeled voxel on each plane and on the model at each region. In the 3D segmentation procedure, the intensity profiles around the boundary between the tentatively labeled prostate and nonprostate tissue are compared to the prostate model. Consequently, the surfaces are modified based on the model intensity profiles. The segmented prostate is updated and compared to the shape model. These two steps are repeated until they converge. Manual segmentation of the prostate serves as the gold standard and a variety of methods are used to evaluate the performance of the segmentation method.

resultsThe results from 40 TRUS image volumes of 20 patients show that the Dice overlap ratio is 90.3% ± 2.3% and that the sensitivity is 87.7% ± 4.9%.

conclusionsThe proposed method provides a useful tool in our 3D ultrasound image-guided prostate biopsy and can also be applied to other applications in the prostate.

Indexed as

Support Vector MachineHumansImaging, Three-DimensionalMaleProstateUltrasonography

Identifiers

PMID22755682
PMCPMC3360689

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.