Evidence map›Paper›PMID 22754318›Full record

ArticleInternational journal of molecular sciences2012

Screening of new microsatellite DNA markers from the genome of Platyeriocheir formosa.

Hui-Ling Cheng, Yan-Horn Lee, Dai-Shion Hsiung, Mei-Chen Tseng

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Hui-Ling ChengDepartment of Environmental Resources Management, Chia Nan University of Pharmacy and Science, Tainan 717, Taiwan.
Yan-Horn LeeBiotechnology Division, Fisheries Research Institute Council of Agriculture, Tungkang, Pingtung 928, Taiwan.
Dai-Shion HsiungDepartment of Aquaculture, National Pingtung University of Science and Technology, Pingtung 912, Taiwan.
Mei-Chen TsengDepartment of Aquaculture, National Pingtung University of Science and Technology, Pingtung 912, Taiwan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The catadromous Platyeriocheir formosa is a crab endemic in Taiwan. To conserve P. formosa population diversity and ensure the sustainable use of this natural resource, we have developed new genetic markers, 17 polymorphic microsatellite loci, to promote the study of its population genetics in the future. In this study, more than 70 microsatellite sequences were found. Among these, 18 loci were selected to analyze the genetic diversity of P. formosa. With the exception of the Pfo15 locus, all of the remaining loci were polymorphic with allelic numbers ranging from 3-14. Heterozygosity within all 17 polymorphic loci ranged from 0.2-0.95 with an average of 0.55, which suggested that these loci are proper markers for studying population genetics. After we tested cross-specific amplification, eight and six primer sets could be successfully used for the amplification of microsatellite loci in morphologically similar Eriocheir sinensis and E. japonica, respectively; this suggests that they are useful markers for closely related species.

Indexed as

Microsatellite RepeatsAllelesAnimalsBrachyuraDNAGenetic VariationGenomeGenotypeTaiwanDNAcatadromouscrabcross-specific amplificationpolymorphic loci

Identifiers

PMID22754318
PMCPMC3382756

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.