Evidence map›Paper›PMID 22753898›Full record

ArticleThe Journal of cell biology2012

Lysosomal calcium homeostasis defects, not proton pump defects, cause endo-lysosomal dysfunction in PSEN-deficient cells.

Katrijn Coen, Ronald S Flannagan, Szilvia Baron, Luciene R Carraro-Lacroix, Dong Wang, Wendy Vermeire, Christine Michiels, Sebastian Munck, Veerle Baert, Shuzo Sugita and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 138 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
138citing papers in PubMed, 1 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

138 citing papers in PubMed, 1 synthesis or guideline pooled it, 206 citations in OpenAlex.

  1. Pooled it
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  6. The connection between autophagy and Alzheimer's disease.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2025
    Review
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  9. Article
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  16. The IPBiochimica et biophysica acta. Molecular basis of disease · 2025
    Article
  17. Mitochondrial dysfunction, cause or consequence in neurodegenerative diseases?BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  18. Article
  19. Review
  20. Review

78 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Katrijn CoenDepartment of Human Genetics, VIB Center for the Biology of Disease, Leuven, Belgium.
Ronald S Flannagan
Szilvia Baron
Luciene R Carraro-Lacroix
Dong Wang
Wendy Vermeire
Christine Michiels
Sebastian Munck
Veerle Baert
Shuzo Sugita
Frank Wuytack
Peter Robin Hiesinger
Sergio Grinstein
Wim Annaert
KU Leuven · BEHospital for Sick Children · CAVIB-KU Leuven Center for Cancer Biology · BEThe University of Texas Southwestern Medical Center · USUniversity of Toronto · CA

Funding

Regulation of Synaptic Specificity in the Visual System by Intracellular TraffickR01EY018884 · NEI · UT SOUTHWESTERN MEDICAL CENTER · PI HIESINGER, PETER ROBIN · 2008 to 2018
$3.6M
Molecular Studies of the Roles and Regulations of the v-ATPase V0 SectorR01GM088803 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI QUIOCHO, FLORANTE A · 2009 to 2010
$971k
CIHRNEI NIH HHS R01 EY018884NEI NIH HHS R01EY018884NIGMS NIH HHS R01 GM088803NIGMS NIH HHS R01GM088803
6 · The paper itself

Abstract

Presenilin (PSEN) deficiency is accompanied by accumulation of endosomes and autophagosomes, likely caused by impaired endo-lysosomal fusion. Recently, Lee et al. (2010. Cell. doi: http://dx.doi.org/10.1016/j.cell.2010.05.008) attributed this phenomenon to PSEN1 enabling the transport of mature V0a1 subunits of the vacuolar ATPase (V-ATPase) to lysosomes. In their view, PSEN1 mediates the N-glycosylation of V0a1 in the endoplasmic reticulum (ER); consequently, PSEN deficiency prevents V0a1 glycosylation, compromising the delivery of unglycosylated V0a1 to lysosomes, ultimately impairing V-ATPase function and lysosomal acidification. We show here that N-glycosylation is not a prerequisite for proper targeting and function of this V-ATPase subunit both in vitro and in vivo in Drosophila melanogaster. We conclude that endo-lysosomal dysfunction in PSEN(-/-) cells is not a consequence of failed N-glycosylation of V0a1, or compromised lysosomal acidification. Instead, lysosomal calcium storage/release is significantly altered in PSEN(-/-) cells and neurons, thus providing an alternative hypothesis that accounts for the impaired lysosomal fusion capacity and accumulation of endomembranes that accompanies PSEN deficiency.

Indexed as

AnimalsBiological TransportCalciumCell LineDrosophila melanogasterDrosophila ProteinsFibroblastsGlycosylationHippocampusHomeostasisHumansLysosomesMiceMice, KnockoutNeuronsPresenilin-1CalciumDrosophila ProteinsPresenilin-1PSEN1 protein, humanVacuolar Proton-Translocating ATPasesVha100-1 protein, Drosophila

Identifiers

PMID22753898
PMCPMC3392942
OpenAlexW2139595374

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.